RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 FGF21Q9NSA1 209 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 SOHLH2Q9NX45 425 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 PAK5Q9P286 719 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 RARRES3Q9UL19 164 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 TCAF1Q9Y4C2 921 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 HEBP2Q9Y5Z4 205 aa13.37□□□□□ -0.27
SCAF1-203ENST00000598359 SLC28A2O43868 658 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 KATNA1O75449 491 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 AP2A2O94973 939 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 FURINP09958 794 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 PVRP15151 417 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 CDH3P22223 829 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 ADRA1DP25100 572 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 NDUFS1P28331 727 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 NSG1P42857 185 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 POLE2P56282 527 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 HSD11B2P80365 405 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 BOP1Q14137 746 aaKnown RBP13.36□□□□□ -0.27
SCAF1-203ENST00000598359 MAP7Q14244 749 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 ITIH4Q14624 930 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 PRAMEF17Q5VTA0 474 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 FAM199XQ6PEV8 388 aaPredicted RBP13.36□□□□□ -0.27
SCAF1-203ENST00000598359 AFTPHQ6ULP2 937 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 GSTA5Q7RTV2 222 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 PRICKLE2Q7Z3G6 844 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 TMEM135Q86UB9 458 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 D2HGDHQ8N465 521 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 LKAAEAR1Q8TD35 194 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 CT55Q8WUE5 264 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 RANBP9Q96S59 729 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 CHRAC1Q9NRG0 131 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 MARCH4Q9P2E8 410 aaPredicted RBP13.36□□□□□ -0.27
SCAF1-203ENST00000598359 POMT2Q9UKY4 750 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 TEX15Q9BXT5 2789 aa13.36□□□□□ -0.27
SCAF1-203ENST00000598359 TLN1Q9Y490 2541 aaKnown RBP13.36□□□□□ -0.27
SCAF1-203ENST00000598359 BSNQ9UPA5 3926 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 IQCF5A8MTL0 148 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 CES2O00748 559 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 TERTO14746 1132 aaKnown RBP13.35□□□□□ -0.27
SCAF1-203ENST00000598359 RRP9O43818 475 aaKnown RBP13.35□□□□□ -0.27
SCAF1-203ENST00000598359 ZBTB11O95625 1053 aaPredicted RBP13.35□□□□□ -0.27
SCAF1-203ENST00000598359 ST6GAL1P15907 406 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 TCN2P20062 427 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 PRDX3P30048 256 aaKnown RBP13.35□□□□□ -0.27
SCAF1-203ENST00000598359 CD151P48509 253 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 BASP1P80723 227 aaKnown RBP13.35□□□□□ -0.27
SCAF1-203ENST00000598359 ACY1Q03154 408 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 ACVR1Q04771 509 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 PRKAA1Q13131 559 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 RPA4Q13156 261 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 ERV3-1Q14264 604 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 TRIP13Q15645 432 aaPredicted RBP13.35□□□□□ -0.27
SCAF1-203ENST00000598359 SYTL3Q4VX76 610 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 TEX35Q5T0J7 233 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 ZNF449Q6P9G9 518 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 PACS1Q6VY07 963 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 TRIM73Q86UV7 250 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 KMT5CQ86Y97 462 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 PPHLN1Q8NEY8 458 aaKnown RBP13.35□□□□□ -0.27
SCAF1-203ENST00000598359 OR4L1Q8NH43 312 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 ZNF501Q96CX3 271 aaPredicted RBP13.35□□□□□ -0.27
SCAF1-203ENST00000598359 EFHD1Q9BUP0 239 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 TRIM4Q9C037 500 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 MVB12BQ9H7P6 319 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 STARD5Q9NSY2 213 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 RNF14Q9UBS8 474 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 TTC7AQ9ULT0 858 aaPredicted RBP13.35□□□□□ -0.27
SCAF1-203ENST00000598359 PLAGL1Q9UM63 463 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 ICKQ9UPZ9 632 aa13.35□□□□□ -0.27
SCAF1-203ENST00000598359 TDRKHQ9Y2W6 561 aaKnown RBP13.35□□□□□ -0.27
SCAF1-203ENST00000598359 TCRBV7S3A2A0A539 114 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 SLC5A10A0PJK1 596 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 BHMG1C9JSJ3 638 aaPredicted RBP13.34□□□□□ -0.27
SCAF1-203ENST00000598359 LIN7AO14910 233 aaPredicted RBP13.34□□□□□ -0.27
SCAF1-203ENST00000598359 SCRG1O75711 98 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 FTH1P02794 183 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 TUBBP07437 444 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 OR56A5P0C7T3 313 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 CCNYL3P0C7X3 344 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 TPBGLP0DKB5 382 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 ACADLP28330 430 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 CCR10P46092 362 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 VPS41P49754 854 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 RPS18P62269 152 aaKnown RBP13.34□□□□□ -0.27
SCAF1-203ENST00000598359 PRAMEP78395 509 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 KCNAB2Q13303 367 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 DNASE1L3Q13609 305 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 FASTKD1Q53R41 847 aaKnown RBP13.34□□□□□ -0.27
SCAF1-203ENST00000598359 DRICH1Q6PGQ1 229 aaPredicted RBP13.34□□□□□ -0.27
SCAF1-203ENST00000598359 CES3Q6UWW8 571 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 AMIGO1Q86WK6 493 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 PTRH1Q86Y79 214 aaKnown RBP13.34□□□□□ -0.27
SCAF1-203ENST00000598359 TMEM126BQ8IUX1 230 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 VRK3Q8IV63 474 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 ADGRF3Q8IZF5 1079 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 PRELID2Q8N945 189 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 LMNTD1Q8N9Z9 388 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 SLC38A9Q8NBW4 561 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.34□□□□□ -0.274e-7■■□□□ 11.8
SCAF1-203ENST00000598359 OSBPL9Q96SU4 736 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms