RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ORAI3Q9BRQ5 295 aa11.82□□□□□ -0.52
SHKBP1-213ENST00000597325 CCM2Q9BSQ5 444 aa11.82□□□□□ -0.52
SHKBP1-213ENST00000597325 VPS11Q9H270 941 aa11.82□□□□□ -0.52
SHKBP1-213ENST00000597325 TM9SF3Q9HD45 589 aa11.82□□□□□ -0.52
SHKBP1-213ENST00000597325 SPATS2LQ9NUQ6 558 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-213ENST00000597325 PCMTD2Q9NV79 361 aa11.82□□□□□ -0.52
SHKBP1-213ENST00000597325 NOVA2Q9UNW9 492 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-213ENST00000597325 GPR34Q9UPC5 381 aa11.82□□□□□ -0.52
SHKBP1-213ENST00000597325 SLC17A4Q9Y2C5 497 aa11.82□□□□□ -0.52
SHKBP1-213ENST00000597325 SETD2Q9BYW2 2564 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 CACNA1DQ01668 2161 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 A0A096LPK6 155 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 PRSS38A1L453 326 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 IQCF5A8MTL0 148 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 TNFRSF10CO14798 259 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 KMOO15229 486 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 PHGDHO43175 533 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 GRID2O43424 1007 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 NUAK1O60285 661 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 DNAJC6O75061 913 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 ALDOAP04075 364 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 APOA4P06727 396 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 VCLP18206 1134 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 CD9P21926 228 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 C21orf59P57076 290 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 ILKQ13418 452 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 BOP1Q14137 746 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 ZKSCAN8Q15776 578 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 INSCQ1MX18 579 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 PLA2G4EQ3MJ16 856 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 KCTD16Q68DU8 428 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 TBC1D1Q86TI0 1168 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 IQCHQ86VS3 1027 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 ZBTB2Q8N680 514 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 SIDT2Q8NBJ9 832 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 ACVR1CQ8NER5 493 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 MZB1Q8WU39 189 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 ELMO1Q92556 727 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 IQCGQ9H095 443 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 SYTL2Q9HCH5 934 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 GPAMQ9HCL2 828 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 ASCL3Q9NQ33 180 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 FAM8A1Q9UBU6 413 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 ZNHIT2Q9UHR6 403 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 ACTL7BQ9Y614 415 aa11.81□□□□□ -0.52
SHKBP1-213ENST00000597325 DNHD1Q96M86 4753 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 A0A1W2PPM1 405 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 KLHL33A6NCF5 533 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 TMEM202A6NGA9 273 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 GOLGA8RI6L899 631 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 CHUKO15111 745 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 DFNA5O60443 496 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 RFPL1O75677 317 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 CEACAM5P06731 702 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 PYGBP11216 843 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 KRT4P19013 534 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 MAGEA12P43365 314 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 GNPDA1P46926 289 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 RGS4P49798 205 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 CLCN7P51798 805 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 KPNA2P52292 529 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 SRP54P61011 504 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 MAGOHP61326 146 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 ZNF460Q14592 562 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 SHBQ15464 509 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 TTMPQ5BVD1 217 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 LRRC8EQ6NSJ5 796 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 XKR5Q6UX68 686 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 PARGQ86W56 976 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 CEP97Q8IW35 865 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 C4orf33Q8N1A6 199 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 SLC22A18ASQ8N1D0 253 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 BEND7Q8N7W2 519 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 HM13Q8TCT9 377 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 LKAAEAR1Q8TD35 194 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 CD200R1Q8TD46 325 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 SAP25Q8TEE9 199 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 INPP5DQ92835 1189 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 TMEM159Q96B96 161 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 ARL8AQ96BM9 186 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 ALKBH8Q96BT7 664 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 TLCD1Q96CP7 247 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 APOPT1Q96IL0 206 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 OR2M4Q96R27 311 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 CARS2Q9HA77 564 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 CYP4F12Q9HCS2 524 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 FGF22Q9HCT0 170 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 KLHL42Q9P2K6 505 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 SUFUQ9UMX1 484 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 ACOT9Q9Y305 439 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 DHRS7Q9Y394 339 aa11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 DNMT3AQ9Y6K1 912 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-213ENST00000597325 SPTY2D1-AS1A0A0U1RR47 76 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 FOXO6A8MYZ6 492 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 TLR4O00206 839 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 COPEO14579 308 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 LIN7AO14910 233 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 SGTAO43765 313 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 GLRA3O75311 464 aa11.79□□□□□ -0.52
SHKBP1-213ENST00000597325 POP7O75817 140 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms