RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 ARMC6Q6NXE6 501 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 TTC23LQ6PF05 361 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 ARHGAP22Q7Z5H3 698 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 RELL1Q8IUW5 271 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 FBXO39Q8N4B4 442 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 AGBL5Q8NDL9 886 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 OR52E1Q8NGJ3 308 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 RSC1A1Q92681 617 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 INPP5DQ92835 1189 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 CD180Q99467 661 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 SRMSQ9H3Y6 488 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 CCDC86Q9H6F5 360 aaKnown RBP25.06■■□□□ 1.6
TRIM28-204ENST00000594806 TAS2R13Q9NYV9 303 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 SATB2Q9UPW6 733 aa25.06■■□□□ 1.6
TRIM28-204ENST00000594806 ESPNB1AK53 854 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 CBSLP0DN79 551 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 ENO3P13929 434 aaPredicted RBP25.05■■□□□ 1.6
TRIM28-204ENST00000594806 CSTF2P33240 577 aaKnown RBP eCLIP25.05■■□□□ 1.6
TRIM28-204ENST00000594806 CBSP35520 551 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 CCNFP41002 786 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 GABREP78334 506 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 ABRQ12979 859 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 PRKAA1Q13131 559 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 C3orf38Q5JPI3 329 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 LRRC8EQ6NSJ5 796 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 DCUN1D3Q8IWE4 304 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 IFT20Q8IY31 132 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 CARFQ8N187 725 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 OR4E2Q8NGC2 313 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 OR5AR1Q8NGP9 310 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 MAGEC3Q8TD91 643 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 C9orf72Q96LT7 481 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 HGH1Q9BTY7 390 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 HRASLS2Q9NWW9 162 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 TMEM9Q9P0T7 183 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 MED16Q9Y2X0 877 aa25.05■■□□□ 1.6
TRIM28-204ENST00000594806 TPRP12270 2363 aaKnown RBP25.04■■□□□ 1.6
TRIM28-204ENST00000594806 C1QTNF9BB2RNN3 333 aa25.04■■□□□ 1.6
TRIM28-204ENST00000594806 C1QTNF9P0C862 333 aa25.04■■□□□ 1.6
TRIM28-204ENST00000594806 SHMT2P34897 504 aa25.04■■□□□ 1.6
TRIM28-204ENST00000594806 PRSS42Q7Z5A4 293 aa25.04■■□□□ 1.6
TRIM28-204ENST00000594806 AMIGO1Q86WK6 493 aa25.04■■□□□ 1.6
TRIM28-204ENST00000594806 SKA2Q8WVK7 121 aaPredicted RBP25.04■■□□□ 1.6
TRIM28-204ENST00000594806 IFT81Q8WYA0 676 aa25.04■■□□□ 1.6
TRIM28-204ENST00000594806 FMO2Q99518 471 aa25.04■■□□□ 1.6
TRIM28-204ENST00000594806 GPR21Q99679 349 aa25.04■■□□□ 1.6
TRIM28-204ENST00000594806 B3GNT4Q9C0J1 378 aa25.04■■□□□ 1.6
TRIM28-204ENST00000594806 LOXL2Q9Y4K0 774 aa25.04■■□□□ 1.6
TRIM28-204ENST00000594806 TCRBV9S1A1TA0A576 114 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 MATN4O95460 622 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 MPOP05164 745 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 RBMS1P29558 406 aaKnown RBP25.03■■□□□ 1.6
TRIM28-204ENST00000594806 STX2P32856 288 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 PRKG2Q13237 762 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 C16orf72Q14CZ0 275 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 FAM45BPQ6NSW5 357 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 CAPN12Q6ZSI9 719 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 STRA8Q7Z7C7 330 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 FAM45AQ8TCE6 357 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 RAD51AP1Q96B01 352 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 FAM136AQ96C01 138 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 SLC46A1Q96NT5 459 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 TGM7Q96PF1 710 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 LRRC4CQ9HCJ2 640 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 OR6C2Q9NZP2 312 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 SEMA5BQ9P283 1151 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 GALPQ9UBC7 116 aa25.03■■□□□ 1.6
TRIM28-204ENST00000594806 TRMT6Q9UJA5 497 aaKnown RBP25.03■■□□□ 1.6
TRIM28-204ENST00000594806 OR6C74A6NCV1 312 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 ITGA2BP08514 1039 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 F7P08709 466 aaPredicted RBP25.02■■□□□ 1.6
TRIM28-204ENST00000594806 JMJD7P0C870 316 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 MPC1LP0DKB6 136 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 MPSTP25325 297 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 GFERP55789 205 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 GPX6P59796 221 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 ERVPABLB-1P60509 514 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 CYP4F3Q08477 520 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 KYNUQ16719 465 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 ACSBG2Q5FVE4 666 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 IRGCQ6NXR0 463 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 KDF1Q8NAX2 398 aaPredicted RBP25.02■■□□□ 1.6
TRIM28-204ENST00000594806 SIDT2Q8NBJ9 832 aaKnown RBP25.02■■□□□ 1.6
TRIM28-204ENST00000594806 RCBTB1Q8NDN9 531 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 CFAP61Q8NHU2 1237 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 CD200R1Q8TD46 325 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 JPH3Q8WXH2 748 aaPredicted RBP25.02■■□□□ 1.6
TRIM28-204ENST00000594806 UBXN4Q92575 508 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 PRR11Q96HE9 360 aaPredicted RBP25.02■■□□□ 1.6
TRIM28-204ENST00000594806 ZNF578Q96N58 590 aaPredicted RBP25.02■■□□□ 1.6
TRIM28-204ENST00000594806 RAB11FIP5Q9BXF6 653 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 TXNDC16Q9P2K2 825 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 TDRKHQ9Y2W6 561 aaKnown RBP25.02■■□□□ 1.6
TRIM28-204ENST00000594806 VWA7Q9Y334 891 aa25.02■■□□□ 1.6
TRIM28-204ENST00000594806 A0A1W2PNU3 283 aaPredicted RBP25.01■■□□□ 1.59
TRIM28-204ENST00000594806 FAM159BA6NKW6 160 aa25.01■■□□□ 1.59
TRIM28-204ENST00000594806 CAPNS1P04632 268 aa25.01■■□□□ 1.59
TRIM28-204ENST00000594806 RGS4P49798 205 aa25.01■■□□□ 1.59
TRIM28-204ENST00000594806 NAB1Q13506 487 aa25.01■■□□□ 1.59
TRIM28-204ENST00000594806 KLHL38Q2WGJ6 581 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms