RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 WDR37Q9Y2I8 494 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 TEX264Q9Y6I9 313 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 ZW10O43264 779 aa19.18■□□□□ 0.66
LSM4-203ENST00000593829 XRCC1P18887 633 aaPredicted RBP19.18■□□□□ 0.66
LSM4-203ENST00000593829 GPR3P46089 330 aa19.18■□□□□ 0.66
LSM4-203ENST00000593829 PDIA2Q13087 525 aaKnown RBP19.18■□□□□ 0.66
LSM4-203ENST00000593829 NR1D2Q14995 579 aa19.18■□□□□ 0.66
LSM4-203ENST00000593829 TYSND1Q2T9J0 566 aa19.18■□□□□ 0.66
LSM4-203ENST00000593829 HES3Q5TGS1 186 aa19.18■□□□□ 0.66
LSM4-203ENST00000593829 TMPRSS7Q7RTY8 843 aa19.18■□□□□ 0.66
LSM4-203ENST00000593829 ZC3H7BQ9UGR2 993 aaKnown RBP19.18■□□□□ 0.66
LSM4-203ENST00000593829 PSMD13Q9UNM6 376 aa19.18■□□□□ 0.66
LSM4-203ENST00000593829 CHMP2BQ9UQN3 213 aa19.18■□□□□ 0.66
LSM4-203ENST00000593829 LRRC42Q9Y546 428 aa19.18■□□□□ 0.66
LSM4-203ENST00000593829 A8MUI8 341 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 E7ESA3 106 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 DCTN3O75935 186 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 GNAZP19086 355 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 CBLBQ13191 982 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 CLCA4Q14CN2 919 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.17■□□□□ 0.66
LSM4-203ENST00000593829 ZNF470Q6ECI4 717 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 CENPUQ71F23 418 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 SPRED1Q7Z699 444 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 LRRC6Q86X45 466 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 CILP2Q8IUL8 1156 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 TRIM48Q8IWZ4 208 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 LMNTD2Q8IXW0 634 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 CALML6Q8TD86 181 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 UTP4Q969X6 686 aaKnown RBP19.17■□□□□ 0.66
LSM4-203ENST00000593829 SH3KBP1Q96B97 665 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 SCNM1Q9BWG6 230 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 TSSK1BQ9BXA7 367 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 ZNF624Q9P2J8 865 aaPredicted RBP19.17■□□□□ 0.66
LSM4-203ENST00000593829 VPS9D1Q9Y2B5 631 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 OR52A4PA6NMU1 304 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 VIPP01282 170 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 RPLP0P05388 317 aaKnown RBP19.17■□□□□ 0.66
LSM4-203ENST00000593829 RPS3P23396 243 aaKnown RBP eCLIP19.17■□□□□ 0.663e-7■□□□□ 8.1
LSM4-203ENST00000593829 ALDH4A1P30038 563 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 WDR4P57081 412 aaKnown RBP19.17■□□□□ 0.66
LSM4-203ENST00000593829 UBE2IP63279 158 aaKnown RBP19.17■□□□□ 0.66
LSM4-203ENST00000593829 CCL7P80098 99 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 ZNF658BQ4V348 819 aaPredicted RBP19.17■□□□□ 0.66
LSM4-203ENST00000593829 ZNF449Q6P9G9 518 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 XKR5Q6UX68 686 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 TRABD2AQ86V40 505 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 APLFQ8IW19 511 aaPredicted RBP19.17■□□□□ 0.66
LSM4-203ENST00000593829 SRRM1Q8IYB3 904 aaKnown RBP19.17■□□□□ 0.66
LSM4-203ENST00000593829 CXorf40BQ96DE9 158 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 CFAP36Q96G28 342 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 SLC38A3Q99624 504 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 P2RY12Q9H244 342 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 LRRN3Q9H3W5 708 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 SYNDIG1Q9H7V2 258 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 COG4Q9H9E3 785 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 RNPEPL1Q9HAU8 725 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 CLCA2Q9UQC9 943 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 STK38LQ9Y2H1 464 aa19.17■□□□□ 0.66
LSM4-203ENST00000593829 ASXL3Q9C0F0 2248 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 UBA6A0AVT1 1052 aaPredicted RBP19.16■□□□□ 0.66
LSM4-203ENST00000593829 HNRNPCL1O60812 293 aaKnown RBP19.16■□□□□ 0.66
LSM4-203ENST00000593829 MT-CO3P00414 261 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 SLC35G4P0C7Q5 338 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 JUPP14923 745 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 SLC19A1P41440 591 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 CLDN6P56747 220 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 OR1D5P58170 312 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 SHC2P98077 582 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 WASHC2DQ5SRD0 308 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 CDCP2Q5VXM1 449 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 PTRHD1Q6GMV3 140 aaKnown RBP19.16■□□□□ 0.66
LSM4-203ENST00000593829 KCNMB4Q86W47 210 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 ANKMY2Q8IV38 441 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 LILRA3Q8N6C8 439 aaPredicted RBP19.16■□□□□ 0.66
LSM4-203ENST00000593829 ENDOVQ8N8Q3 282 aaKnown RBP19.16■□□□□ 0.66
LSM4-203ENST00000593829 ELMO1Q92556 727 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 LPGAT1Q92604 370 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 WDR83Q9BRX9 315 aaKnown RBP19.16■□□□□ 0.66
LSM4-203ENST00000593829 FAM167BQ9BTA0 163 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.16■□□□□ 0.66
LSM4-203ENST00000593829 WWP1Q9H0M0 922 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 POT1Q9NUX5 634 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 INTS10Q9NVR2 710 aaKnown RBP19.16■□□□□ 0.66
LSM4-203ENST00000593829 GNPTGQ9UJJ9 305 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 KLK13Q9UKR3 277 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 ANGPTL2Q9UKU9 493 aa19.16■□□□□ 0.66
LSM4-203ENST00000593829 A6NHS1 94 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 NTN3O00634 580 aaPredicted RBP19.15■□□□□ 0.66
LSM4-203ENST00000593829 SPINK2P20155 84 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 RPA4Q13156 261 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 SPIDRQ14159 915 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 RPE65Q16518 533 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 HSP90AA5PQ58FG0 334 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 UNC5AQ6ZN44 842 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 UNC5BQ8IZJ1 945 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 CACTIN-AS1Q8N1I8 211 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 FBXO36Q8NEA4 188 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 GABPB2Q8TAK5 448 aaPredicted RBP19.15■□□□□ 0.66
LSM4-203ENST00000593829 GFM1Q96RP9 751 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms