RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 GPATCH11Q8N954 259 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 ANKRD42Q8N9B4 389 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 RASGEF1AQ8N9B8 481 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 ZNF548Q8NEK5 533 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-219ENST00000592927 LMX1AQ8TE12 382 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 SGF29Q96ES7 293 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 ZNF514Q96K75 400 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-219ENST00000592927 OR2M4Q96R27 311 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 AARSD1Q9BTE6 412 aaKnown RBP11.66□□□□□ -0.54
DDX39A-219ENST00000592927 BOCQ9BWV1 1114 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 NRSN2Q9GZP1 204 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 TMEM168Q9H0V1 697 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 VPS11Q9H270 941 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 CAAP1Q9H8G2 361 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 TRNAU1APQ9NX07 287 aaKnown RBP11.66□□□□□ -0.54
DDX39A-219ENST00000592927 GPR34Q9UPC5 381 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 CRYL1Q9Y2S2 319 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 ACOT9Q9Y305 439 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 PRKAB1Q9Y478 270 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 UBA6A0AVT1 1052 aaPredicted RBP11.65□□□□□ -0.54
DDX39A-219ENST00000592927 NEMP2A6NFY4 417 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 OR2AG2A6NM03 316 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 F8W8V4 182 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 PRMT5O14744 637 aaPredicted RBP11.65□□□□□ -0.54
DDX39A-219ENST00000592927 AQP9O43315 295 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 PCDHGA12O60330 932 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 BRINP1O60477 761 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 AP2A2O94973 939 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 APOA4P06727 396 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 GP1BBP13224 206 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 PKMP14618 531 aaKnown RBP11.65□□□□□ -0.54
DDX39A-219ENST00000592927 FDXRP22570 491 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 GRK6P43250 576 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 CTSCP53634 463 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 TMPRSS3P57727 454 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 GNGT1P63211 74 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 B4GALNT1Q00973 533 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 GUCY1A3Q02108 690 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 ILF3Q12906 894 aaKnown RBP eCLIP11.65□□□□□ -0.54
DDX39A-219ENST00000592927 C1orf61Q13536 156 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 LRP8Q14114 963 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 RBM20Q5T481 1227 aaKnown RBP11.65□□□□□ -0.54
DDX39A-219ENST00000592927 UGT3A1Q6NUS8 523 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 LVRNQ6Q4G3 990 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 CHST15Q7LFX5 561 aaPredicted RBP11.65□□□□□ -0.54
DDX39A-219ENST00000592927 CLEC14AQ86T13 490 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 TBC1D1Q86TI0 1168 aaPredicted RBP11.65□□□□□ -0.54
DDX39A-219ENST00000592927 GATAD2AQ86YP4 633 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 MGARPQ8TDB4 240 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 SAP25Q8TEE9 199 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 CKAP2Q8WWK9 683 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 TTC9Q92623 222 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 NAF1Q96HR8 494 aaKnown RBP11.65□□□□□ -0.54
DDX39A-219ENST00000592927 LRRC61Q9BV99 259 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 GSDMCQ9BYG8 508 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 CLPBQ9H078 707 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 CAB39LQ9H9S4 337 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 SYTL2Q9HCH5 934 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 TAS2R13Q9NYV9 303 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 GNPTGQ9UJJ9 305 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 MID2Q9UJV3 735 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 DOLKQ9UPQ8 538 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 PCYT1BQ9Y5K3 369 aaPredicted RBP11.65□□□□□ -0.54
DDX39A-219ENST00000592927 CSNK1G3Q9Y6M4 447 aa11.65□□□□□ -0.54
DDX39A-219ENST00000592927 PIKFYVEQ9Y2I7 2098 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 QSOX1O00391 747 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 OR1I1O60431 355 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 VPS26AO75436 327 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 POP7O75817 140 aaKnown RBP11.64□□□□□ -0.55
DDX39A-219ENST00000592927 F7P08709 466 aaPredicted RBP11.64□□□□□ -0.55
DDX39A-219ENST00000592927 OR56A5P0C7T3 313 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 DHRS4L1P0CG22 281 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 SLC35E2BP0CK96 405 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 ACP5P13686 325 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 VCLP18206 1134 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 SAT1P21673 171 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 LSP1P33241 339 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 SKIV2L2P42285 1042 aaKnown RBP11.64□□□□□ -0.55
DDX39A-219ENST00000592927 ETV4P43268 484 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 WDR4P57081 412 aaKnown RBP11.64□□□□□ -0.55
DDX39A-219ENST00000592927 CTBSQ01459 385 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 FAM83EQ2M2I3 478 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 INAVAQ3KP66 663 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 PLA2G4EQ3MJ16 856 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 BCL7AQ4VC05 210 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 BROXQ5VW32 411 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 ZNF549Q6P9A3 640 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 TAF8Q7Z7C8 310 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 GKN2Q86XP6 184 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 ZNF547Q8IVP9 402 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 CEP97Q8IW35 865 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 SDR16C5Q8N3Y7 309 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 SLC25A45Q8N413 288 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 CLDN19Q8N6F1 224 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 ACVR1CQ8NER5 493 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 GPBAR1Q8TDU6 330 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 NAT14Q8WUY8 206 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 KCNJ9Q92806 393 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 CCDC97Q96F63 343 aaPredicted RBP11.64□□□□□ -0.55
DDX39A-219ENST00000592927 MAGEB18Q96M61 343 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms