RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SOX13Q9UN79 622 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 NEU2Q9Y3R4 380 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 CFAP20Q9Y6A4 193 aaKnown RBP10.13□□□□□ -0.79
SDF2-208ENST00000589788 CACNA1BQ00975 2339 aa10.13□□□□□ -0.79
SDF2-208ENST00000589788 FRYQ5TBA9 3013 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 PRAMEF33A0A0G2JMD5 474 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 SDR42E2A6NKP2 422 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 EFCAB8A8MWE9 144 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 GOLGA8MH3BSY2 632 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 CD3EAPO15446 510 aaKnown RBP10.12□□□□□ -0.79
SDF2-208ENST00000589788 TLX3O43711 291 aaPredicted RBP10.12□□□□□ -0.79
SDF2-208ENST00000589788 AVILO75366 819 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 TMEM63AO94886 807 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 UBXN7O94888 489 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 VAPBO95292 243 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 THRAP10827 490 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 HGFP14210 728 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 PAMP19021 973 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 CSTF2P33240 577 aaKnown RBP eCLIP10.12□□□□□ -0.79
SDF2-208ENST00000589788 SOX18P35713 384 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 TTPAP49638 278 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 MAPK10P53779 464 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 PCBP4P57723 403 aaKnown RBP10.12□□□□□ -0.79
SDF2-208ENST00000589788 TUBB4BP68371 445 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 CFHR1Q03591 330 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 RPA4Q13156 261 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 PTK6Q13882 451 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 C16orf72Q14CZ0 275 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 PLCL1Q15111 1095 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 KLHL35Q6PF15 583 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 CES3Q6UWW8 571 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 CAND1Q86VP6 1230 aaKnown RBP10.12□□□□□ -0.79
SDF2-208ENST00000589788 PLXDC1Q8IUK5 500 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 PPIL6Q8IXY8 311 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 LILRA3Q8N6C8 439 aaPredicted RBP10.12□□□□□ -0.79
SDF2-208ENST00000589788 NOA1Q8NC60 698 aaKnown RBP10.12□□□□□ -0.79
SDF2-208ENST00000589788 LRRN4CLQ8ND94 238 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 AGBL5Q8NDL9 886 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 RCBTB1Q8NDN9 531 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 NANOS1Q8WY41 292 aaKnown RBP10.12□□□□□ -0.79
SDF2-208ENST00000589788 SLCO2A1Q92959 643 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 PRR11Q96HE9 360 aaPredicted RBP10.12□□□□□ -0.79
SDF2-208ENST00000589788 TSSK1BQ9BXA7 367 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 COG4Q9H9E3 785 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 ASCL3Q9NQ33 180 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 TREX1Q9NSU2 369 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 TMEM9Q9P0T7 183 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 KLHL3Q9UH77 587 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 HEBP2Q9Y5Z4 205 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 COLEC10Q9Y6Z7 277 aa10.12□□□□□ -0.79
SDF2-208ENST00000589788 MAGEB16A2A368 324 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 CDC14CA4D256 554 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 A8MU76 341 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 CDRT15L2A8MXV6 281 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 IFRD1O00458 451 aaPredicted RBP10.11□□□□□ -0.79
SDF2-208ENST00000589788 LIN7AO14910 233 aaPredicted RBP10.11□□□□□ -0.79
SDF2-208ENST00000589788 PFDN6O15212 129 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 OR1I1O60431 355 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 NDUFS3O75489 264 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 ITIH1P19827 911 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 NDUFS1P28331 727 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 EIF2S3P41091 472 aaKnown RBP10.11□□□□□ -0.79
SDF2-208ENST00000589788 CAPZBP47756 277 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 DR1Q01658 176 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 BOP1Q14137 746 aaKnown RBP10.11□□□□□ -0.79
SDF2-208ENST00000589788 DHX34Q14147 1143 aaKnown RBP10.11□□□□□ -0.79
SDF2-208ENST00000589788 SEMA3AQ14563 771 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 SYTL3Q4VX76 610 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 GLE1Q53GS7 698 aaKnown RBP10.11□□□□□ -0.79
SDF2-208ENST00000589788 MRNIPQ6NTE8 343 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 DUS1LQ6P1R4 473 aaKnown RBP10.11□□□□□ -0.79
SDF2-208ENST00000589788 SYDE1Q6ZW31 735 aaPredicted RBP10.11□□□□□ -0.79
SDF2-208ENST00000589788 PCGF5Q86SE9 256 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 SDCCAG8Q86SQ7 713 aaPredicted RBP10.11□□□□□ -0.79
SDF2-208ENST00000589788 VWA5B2Q8N398 1253 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 MPP5Q8N3R9 675 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 ZNF248Q8NDW4 579 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 GPR150Q8NGU9 434 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 ZFPM2Q8WW38 1151 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 ELMO1Q92556 727 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 PMEPA1Q969W9 287 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 MFSD3Q96ES6 412 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 NAF1Q96HR8 494 aaKnown RBP10.11□□□□□ -0.79
SDF2-208ENST00000589788 RMDN2Q96LZ7 410 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 SERPINB12Q96P63 405 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 TGM7Q96PF1 710 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 KRT12Q99456 494 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 MARCH4Q9P2E8 410 aaPredicted RBP10.11□□□□□ -0.79
SDF2-208ENST00000589788 PDP2Q9P2J9 529 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 MAD1L1Q9Y6D9 718 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 PRSS21Q9Y6M0 314 aa10.11□□□□□ -0.79
SDF2-208ENST00000589788 ANKRD11Q6UB99 2663 aaPredicted RBP10.11□□□□□ -0.79
SDF2-208ENST00000589788 A0A087WV48 116 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 FAM237BA0A1B0GVD1 139 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 PRMT5O14744 637 aaPredicted RBP10.1□□□□□ -0.79
SDF2-208ENST00000589788 RASSF9O75901 435 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 SLC5A2P31639 672 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 PREPP48147 710 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 CD151P48509 253 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 PLOD1Q02809 727 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms