RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	BCL2A1	Q16548	175 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	PPP1R3A	Q16821	1122 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	ZNF284	Q2VY69	593 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	TMEM52B	Q4KMG9	183 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	PIP5KL1	Q5T9C9	394 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	CYHR1	Q6ZMK1	362 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	CSGALNACT1	Q8TDX6	532 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	BTN2A2	Q8WVV5	523 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	AP2M1	Q96CW1	435 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	HSPBAP1	Q96EW2	488 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	TRMO	Q9BU70	441 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	NUF2	Q9BZD4	464 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	RSPH9	Q9H1X1	276 aa	Predicted RBP	15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	PALMD	Q9NP74	551 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	SCHIP1	Q9P0W5	487 aa	Predicted RBP	15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	KLHL42	Q9P2K6	505 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	POMP	Q9Y244	141 aa		15.1	■□□□□ 0.01
DDX39A-209	ENST00000589318	SUPT7L	O94864	414 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	C6	P13671	934 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	GFAP	P14136	432 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	CNTN1	Q12860	1018 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	GBX1	Q14549	363 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	TGFBI	Q15582	683 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	DET1	Q7L5Y6	550 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	CUZD1	Q86UP6	607 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	FBXO39	Q8N4B4	442 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	SCAI	Q8N9R8	606 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	LRGUK	Q96M69	825 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	NSUN5	Q96P11	429 aa	Known RBP	15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	C1QTNF3	Q9BXJ4	246 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	TSR3	Q9UJK0	312 aa	Known RBP	15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	TMEM98	Q9Y2Y6	226 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	AP4B1	Q9Y6B7	739 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	STX16-NPEPL1	H3BU86	382 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	STX16	O14662	325 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	NPC1	O15118	1278 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	RECQL5	O94762	991 aa	Predicted RBP	15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	CAPNS1	P04632	268 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	C8B	P07358	591 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	RPS17	P08708	135 aa	Known RBP	15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	OR56A5	P0C7T3	313 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	TSPAN8	P19075	237 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	DGKA	P23743	735 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	AOAH	P28039	575 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	AKT1	P31749	480 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	TIE1	P35590	1138 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	ALDH3B2	P48448	385 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	ALDH18A1	P54886	795 aa	Known RBP	15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	SEC13	P55735	322 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	MYBPC1	Q00872	1141 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	ZNF423	Q2M1K9	1284 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	FBXO48	Q5FWF7	155 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	ZNF648	Q5T619	568 aa	Predicted RBP	15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	FAM219B	Q5XKK7	198 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	SEL1L3	Q68CR1	1132 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	GPSM1	Q86YR5	675 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	SLC15A3	Q8IY34	581 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	AADAT	Q8N5Z0	425 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	GLYATL1	Q969I3	302 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	BORCS5	Q969J3	196 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	SERPINI1	Q99574	410 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	DYRK4	Q9NR20	520 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	KCTD5	Q9NXV2	234 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	CNOT6	Q9ULM6	557 aa	Known RBP	15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	MYO10	Q9HD67	2058 aa		15.09	■□□□□ 0.01
DDX39A-209	ENST00000589318	NCF1B	A6NI72	391 aa	Predicted RBP	15.08	■□□□□ 0
DDX39A-209	ENST00000589318	NCF1C	A8MVU1	366 aa	Predicted RBP	15.08	■□□□□ 0
DDX39A-209	ENST00000589318	PPP6C	O00743	305 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	MID1	O15344	667 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	MMP20	O60882	483 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	ESRRB	O95718	433 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	NCF1	P14598	390 aa	Predicted RBP	15.08	■□□□□ 0
DDX39A-209	ENST00000589318	PCSK6	P29122	969 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	EEF1D	P29692	281 aa	Known RBP	15.08	■□□□□ 0
DDX39A-209	ENST00000589318	HMOX2	P30519	316 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	HAL	P42357	657 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	RGS4	P49798	205 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	AGTR2	P50052	363 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	CDH13	P55290	713 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	TAS2R38	P59533	333 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	CST6	Q15828	149 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	CRY1	Q16526	586 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	ZNF765	Q7L2R6	523 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	ADAMTSL2	Q86TH1	951 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	GIPC3	Q8TF64	312 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	STON2	Q8WXE9	905 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	DLG3	Q92796	817 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	OR52B2	Q96RD2	323 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	PRPF18	Q99633	342 aa	Known RBP	15.08	■□□□□ 0
DDX39A-209	ENST00000589318	VTI1B	Q9UEU0	232 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	PRPF19	Q9UMS4	504 aa	Known RBP	15.08	■□□□□ 0
DDX39A-209	ENST00000589318	APOBEC2	Q9Y235	224 aa	Known RBP	15.08	■□□□□ 0
DDX39A-209	ENST00000589318	ASB1	Q9Y576	335 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	DOCK9	Q9BZ29	2069 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	TRPM6	Q9BX84	2022 aa		15.08	■□□□□ 0
DDX39A-209	ENST00000589318	SLCO1B7	G3V0H7	640 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318		K7ESM1	405 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	MAGEB3	O15480	346 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	CDK14	O94921	469 aa		15.07	■□□□□ 0
DDX39A-209	ENST00000589318	SH3BP2	P78314	561 aa		15.07	■□□□□ 0

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms