RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 ACADLP28330 430 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 FMO4P31512 558 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 SHMT2P34897 504 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 KPNA2P52292 529 aaKnown RBP14.4□□□□□ -0.1
ATG4D-207ENST00000587256 DHX9Q08211 1270 aaKnown RBP14.4□□□□□ -0.1
ATG4D-207ENST00000587256 MORF4L2Q15014 288 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 LONRF1Q17RB8 773 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 BBS9Q3SYG4 887 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 MANEAQ5SRI9 462 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 CYB5D1Q6P9G0 228 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 OTOAQ7RTW8 1153 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 VASH2Q86V25 355 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 AMIGO1Q86WK6 493 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 CILP2Q8IUL8 1156 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 VRK3Q8IV63 474 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 PDIK1LQ8N165 341 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 SIDT2Q8NBJ9 832 aaKnown RBP14.4□□□□□ -0.1
ATG4D-207ENST00000587256 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.4□□□□□ -0.1
ATG4D-207ENST00000587256 OR5K2Q8NHB8 316 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 CFAP61Q8NHU2 1237 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 KLHL6Q8WZ60 621 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 FAM136AQ96C01 138 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 SNF8Q96H20 258 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 ELMO2Q96JJ3 720 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 SIGLEC10Q96LC7 697 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 OR6C1Q96RD1 312 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 CCNL2Q96S94 520 aaPredicted RBP14.4□□□□□ -0.1
ATG4D-207ENST00000587256 FAM167BQ9BTA0 163 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 TRIM31Q9BZY9 425 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 SOHLH2Q9NX45 425 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 POLG2Q9UHN1 485 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 RALYQ9UKM9 306 aaKnown RBP14.4□□□□□ -0.1
ATG4D-207ENST00000587256 POMT2Q9UKY4 750 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 CRYL1Q9Y2S2 319 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 CFAP47Q6ZTR5 3102 aa14.4□□□□□ -0.1
ATG4D-207ENST00000587256 ZFHX4Q86UP3 3567 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 ZCWPW2A0A1B0GU75 182 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 EFCAB8A8MWE9 144 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 E5RI56 91 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 SMAPO00193 183 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 BTN3A3O00478 584 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 BTN3A1O00481 513 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 NIPSNAP2O75323 286 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 GPC4O75487 556 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 CDH3P22223 829 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 SLC1A2P43004 574 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 TUBB3Q13509 450 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 CRYMQ14894 314 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 ARHGAP40Q5TG30 622 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 CCDC81Q6ZN84 652 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 CENPUQ71F23 418 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 KCNMB4Q86W47 210 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 DTX1Q86Y01 620 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 KMT5CQ86Y97 462 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 LMNTD2Q8IXW0 634 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 IL22RA1Q8N6P7 574 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 CALML6Q8TD86 181 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 SLC41A2Q96JW4 573 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 BIRC8Q96P09 236 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 NRTNQ99748 197 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 CCDC68Q9H2F9 335 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 PRORYQ9H606 182 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 FBXO6Q9NRD1 293 aaPredicted RBP14.39□□□□□ -0.11
ATG4D-207ENST00000587256 INTS10Q9NVR2 710 aaKnown RBP14.39□□□□□ -0.11
ATG4D-207ENST00000587256 TSR3Q9UJK0 312 aaKnown RBP14.39□□□□□ -0.11
ATG4D-207ENST00000587256 PLAGL1Q9UM63 463 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 ICKQ9UPZ9 632 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 SDK2Q58EX2 2172 aa14.39□□□□□ -0.11
ATG4D-207ENST00000587256 C2orf74A8MZ97 194 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 RAD1O60671 282 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 STK17BO94768 372 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 SEC31AO94979 1220 aaKnown RBP14.38□□□□□ -0.11
ATG4D-207ENST00000587256 ZBTB11O95625 1053 aaPredicted RBP14.38□□□□□ -0.11
ATG4D-207ENST00000587256 TTC4O95801 387 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 F7P08709 466 aaPredicted RBP14.38□□□□□ -0.11
ATG4D-207ENST00000587256 EBLN1P0CF75 366 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 PKMP14618 531 aaKnown RBP14.38□□□□□ -0.11
ATG4D-207ENST00000587256 IVDP26440 423 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 ITGA8P53708 1063 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 ADARP55265 1226 aaKnown RBP14.38□□□□□ -0.11
ATG4D-207ENST00000587256 HSD11B2P80365 405 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 C2orf54Q08AI8 447 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 VAC14Q08AM6 782 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 ABRQ12979 859 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 CTBP1Q13363 440 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 KCNAB1Q14722 419 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 HIF1AQ16665 826 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 TMTC4Q5T4D3 741 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 UNC5DQ6UXZ4 953 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 GPR155Q7Z3F1 870 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 RASGRP3Q8IV61 690 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 DCUN1D3Q8IWE4 304 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 DENND6AQ8IWF6 608 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 CARFQ8N187 725 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 GABPB2Q8TAK5 448 aaPredicted RBP14.38□□□□□ -0.11
ATG4D-207ENST00000587256 RNF31Q96EP0 1072 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 C16orf45Q96MC5 204 aaPredicted RBP14.38□□□□□ -0.11
ATG4D-207ENST00000587256 EBNA1BP2Q99848 306 aaKnown RBP14.38□□□□□ -0.11
ATG4D-207ENST00000587256 NAT9Q9BTE0 207 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 ULBP3Q9BZM4 244 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms