RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 SQSTM1Q13501 440 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 CLPPQ16740 277 aaPredicted RBP20.87■□□□□ 0.93
RETREG3-204ENST00000586796 KLHL38Q2WGJ6 581 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 KBTBD12Q3ZCT8 623 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 UBAP2Q5T6F2 1119 aaKnown RBP20.87■□□□□ 0.93
RETREG3-204ENST00000586796 UGT3A1Q6NUS8 523 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 IRGCQ6NXR0 463 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 WDR74Q6RFH5 385 aaPredicted RBP20.87■□□□□ 0.93
RETREG3-204ENST00000586796 SLITRK4Q8IW52 837 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 CPNE9Q8IYJ1 553 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 PPM1NQ8N819 430 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 OR5K2Q8NHB8 316 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 CD200R1Q8TD46 325 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 FOPNLQ96NB1 174 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 DPYSL5Q9BPU6 564 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 STRADBQ9C0K7 418 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 CDC42EP4Q9H3Q1 356 aaKnown RBP20.87■□□□□ 0.93
RETREG3-204ENST00000586796 SRMSQ9H3Y6 488 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 HRASLS2Q9NWW9 162 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 TAS2R13Q9NYV9 303 aa20.87■□□□□ 0.93
RETREG3-204ENST00000586796 TRABD2BA6NFA1 517 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 TMX2-CTNND1H3BSU7 103 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 CAPN5O15484 640 aaPredicted RBP20.86■□□□□ 0.93
RETREG3-204ENST00000586796 SPAG6O75602 509 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 ACSL3O95573 720 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 CAPZBP47756 277 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 LIMK2P53671 638 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 CAMK2BQ13554 666 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 EFTUD2Q15029 972 aaKnown RBP eCLIP20.86■□□□□ 0.934e-7■■■□□ 16.7
RETREG3-204ENST00000586796 C3orf38Q5JPI3 329 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 FAM45BPQ6NSW5 357 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 ARMC6Q6NXE6 501 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 KLHL35Q6PF15 583 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 UNC5DQ6UXZ4 953 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 CYS1Q717R9 158 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 ZC3HC1Q86WB0 502 aaKnown RBP20.86■□□□□ 0.93
RETREG3-204ENST00000586796 PLXDC1Q8IUK5 500 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 GSPT2Q8IYD1 628 aaKnown RBP20.86■□□□□ 0.93
RETREG3-204ENST00000586796 FAM45AQ8TCE6 357 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 MRRFQ96E11 262 aaKnown RBP20.86■□□□□ 0.93
RETREG3-204ENST00000586796 POLG2Q9UHN1 485 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 VWA7Q9Y334 891 aa20.86■□□□□ 0.93
RETREG3-204ENST00000586796 COL27A1Q8IZC6 1860 aaPredicted RBP20.86■□□□□ 0.93
RETREG3-204ENST00000586796 SLU7O95391 586 aaKnown RBP20.85■□□□□ 0.93
RETREG3-204ENST00000586796 RPN2P04844 631 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 MPOP05164 745 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 POLR2CP19387 275 aaPredicted RBP20.85■□□□□ 0.93
RETREG3-204ENST00000586796 CCKBRP32239 447 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 PHBP35232 272 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 BDKRB1P46663 353 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 PPP1CAP62136 330 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 TIAL1Q01085 375 aaKnown RBP eCLIP20.85■□□□□ 0.93
RETREG3-204ENST00000586796 PDAP1Q13442 181 aaKnown RBP20.85■□□□□ 0.93
RETREG3-204ENST00000586796 GBX1Q14549 363 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 PAQR3Q6TCH7 311 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 FAM92BQ6ZTR7 304 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 AMIGO1Q86WK6 493 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 OOSP2Q86WS3 158 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 OLFM1Q99784 485 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 TFB2MQ9H5Q4 396 aaKnown RBP20.85■□□□□ 0.93
RETREG3-204ENST00000586796 KLHL42Q9P2K6 505 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 CORO1CQ9ULV4 474 aaPredicted RBP20.85■□□□□ 0.93
RETREG3-204ENST00000586796 SATB2Q9UPW6 733 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 AK5Q9Y6K8 562 aa20.85■□□□□ 0.93
RETREG3-204ENST00000586796 FAM95CA0A1B0GW59 222 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 PMS2P1A4D2B8 440 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 OR5K3A6NET4 321 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 C1QAP02745 245 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 THRAP10827 490 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 ATP5DP30049 168 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 TTC23LQ6PF05 361 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 RELL1Q8IUW5 271 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 DCUN1D3Q8IWE4 304 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 GRAMD1AQ96CP6 724 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 VPS39Q96JC1 886 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 CPNE1Q99829 537 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 RHOJQ9H4E5 214 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 ICKQ9UPZ9 632 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 CACNA1AO00555 2505 aa20.84■□□□□ 0.93
RETREG3-204ENST00000586796 CCDC187A0A096LP49 1063 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 GSAPA4D1B5 854 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 KIF1CO43896 1103 aaKnown RBP20.83■□□□□ 0.93
RETREG3-204ENST00000586796 RASSF9O75901 435 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 FAM155BO75949 473 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 C1orf105O95561 183 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 FAM153BP0C7A2 387 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 TPBGLP0DKB5 382 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 HGFP14210 728 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 FDXRP22570 491 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 SKIV2L2P42285 1042 aaKnown RBP20.83■□□□□ 0.93
RETREG3-204ENST00000586796 GABREP78334 506 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 PRKAA1Q13131 559 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 C16orf72Q14CZ0 275 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 FAM153CQ494X1 144 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 RAB11FIP2Q7L804 512 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 PIWIL4Q7Z3Z4 852 aaKnown RBP20.83■□□□□ 0.93
RETREG3-204ENST00000586796 FBXO39Q8N4B4 442 aa20.83■□□□□ 0.93
RETREG3-204ENST00000586796 WDR36Q8NI36 951 aaKnown RBP20.83■□□□□ 0.93
RETREG3-204ENST00000586796 UHMK1Q8TAS1 419 aaKnown RBP20.83■□□□□ 0.93
RETREG3-204ENST00000586796 EEF1AKMT1Q8WVE0 214 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms