RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 ERLEC1Q96DZ1 483 aa21.77■■□□□ 1.08
CIRBP-208ENST00000586548 ZNF514Q96K75 400 aaPredicted RBP21.77■■□□□ 1.08
CIRBP-208ENST00000586548 SLC29A3Q9BZD2 475 aa21.77■■□□□ 1.08
CIRBP-208ENST00000586548 BRINP2Q9C0B6 783 aa21.77■■□□□ 1.08
CIRBP-208ENST00000586548 TRIM39Q9HCM9 518 aa21.77■■□□□ 1.08
CIRBP-208ENST00000586548 NOP53Q9NZM5 478 aaKnown RBP21.77■■□□□ 1.08
CIRBP-208ENST00000586548 FAM8A1Q9UBU6 413 aa21.77■■□□□ 1.08
CIRBP-208ENST00000586548 C5orf42Q9H799 3197 aa21.77■■□□□ 1.07
CIRBP-208ENST00000586548 REV3LO60673 3130 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 ANHXE9PGG2 379 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 NRP2O60462 931 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 SYNCRIPO60506 623 aaKnown RBP21.76■■□□□ 1.07
CIRBP-208ENST00000586548 LILRB5O75023 590 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 C5AR1P21730 350 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 GTF2H3Q13889 308 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 LRP8Q14114 963 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 RCN1Q15293 331 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 C6orf136Q5SQH8 315 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 AGBL4Q5VU57 503 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 TRIM74Q86UV6 250 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 HPS6Q86YV9 775 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 CDRT15Q96T59 188 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 OR2AG1Q9H205 316 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 POMPQ9Y244 141 aa21.76■■□□□ 1.07
CIRBP-208ENST00000586548 ZFC3H1O60293 1989 aaKnown RBP21.76■■□□□ 1.07
CIRBP-208ENST00000586548 LOC730098B7Z3J9 87 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 MRASO14807 208 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 LIN7AO14910 233 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-208ENST00000586548 VEGFDO43915 354 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 MAP4P27816 1152 aaKnown RBP21.75■■□□□ 1.07
CIRBP-208ENST00000586548 PREPP48147 710 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 DIO3P55073 304 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 PDCD4Q53EL6 469 aaKnown RBP21.75■■□□□ 1.07
CIRBP-208ENST00000586548 MYLK4Q86YV6 388 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-208ENST00000586548 SFRP1Q8N474 314 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 SMRP1Q8NCR6 262 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 TSPEARQ8WU66 669 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 TMEM45AQ9NWC5 275 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 RNF11Q9Y3C5 154 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 ARHGEF33A8MVX0 844 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 CLDN9O95484 217 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 CATP04040 527 aaKnown RBP21.75■■□□□ 1.07
CIRBP-208ENST00000586548 EPORP19235 508 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 PBLDP30039 288 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-208ENST00000586548 TIE1P35590 1138 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 CCR3P51677 355 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 ABRQ12979 859 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 COL19A1Q14993 1142 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 ABRAXAS2Q15018 415 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 ZXDCQ2QGD7 858 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-208ENST00000586548 PTCHD3Q3KNS1 767 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 GGTA1PQ4G0N0 100 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 PIGGQ5H8A4 983 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 ADAMTSL4Q6UY14 1074 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 TRAPPC5Q8IUR0 188 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 FNDC5Q8NAU1 212 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 JADE3Q92613 823 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 EZH1Q92800 747 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-208ENST00000586548 CCDC124Q96CT7 223 aaKnown RBP21.75■■□□□ 1.07
CIRBP-208ENST00000586548 HIC2Q96JB3 615 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 LINC00615Q96LM1 132 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-208ENST00000586548 HEBP1Q9NRV9 189 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 ATXN10Q9UBB4 475 aa21.75■■□□□ 1.07
CIRBP-208ENST00000586548 SLC28A1O00337 649 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 LSM1O15116 133 aaKnown RBP21.74■■□□□ 1.07
CIRBP-208ENST00000586548 CFLARO15519 480 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 SORBS2O94875 1100 aaKnown RBP21.74■■□□□ 1.07
CIRBP-208ENST00000586548 GNAZP19086 355 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 SEC13P55735 322 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 TAS2R38P59533 333 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 NR6A1Q15406 480 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 CCDC6Q16204 474 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 C2orf27AQ580R0 203 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 ZNF776Q68DI1 518 aaPredicted RBP21.74■■□□□ 1.07
CIRBP-208ENST00000586548 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.74■■□□□ 1.07
CIRBP-208ENST00000586548 LILRA3Q8N6C8 439 aaPredicted RBP21.74■■□□□ 1.07
CIRBP-208ENST00000586548 EFCAB3Q8N7B9 438 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 PCYOX1LQ8NBM8 494 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 COX14Q96I36 57 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 FOPNLQ96NB1 174 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 DNAJC11Q9NVH1 559 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 STX18Q9P2W9 335 aaKnown RBP21.74■■□□□ 1.07
CIRBP-208ENST00000586548 KLQ9UEF7 1012 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 GPR34Q9UPC5 381 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 NDUFAF1Q9Y375 327 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 PCDHGA7Q9Y5G6 932 aa21.74■■□□□ 1.07
CIRBP-208ENST00000586548 C17orf113A0A1B0GUU1 675 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 NR5A2O00482 541 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 FKBP6O75344 327 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 NME5P56597 212 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 PSME3P61289 254 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 EMX2Q04743 252 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 ZNF423Q2M1K9 1284 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 SMU1Q2TAY7 513 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 COQ5Q5HYK3 327 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.73■■□□□ 1.07
CIRBP-208ENST00000586548 HDDC3Q8N4P3 179 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 OR2T3Q8NH03 318 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 ATL1Q8WXF7 558 aa21.73■■□□□ 1.07
CIRBP-208ENST00000586548 ROPN1LQ96C74 230 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms