RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.01□□□□□ -0.49
SS18-225ENST00000585121 GOLGA6L10A0A0M3HER8 536 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 SLC5A10A0PJK1 596 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 SLC9B1P1A6NJY1 282 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 ESPNB1AK53 854 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 PGRMC1O00264 195 aaKnown RBP12.01□□□□□ -0.49
SS18-225ENST00000585121 BTN3A1O00481 513 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 KATNA1O75449 491 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 KRT14P02533 472 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 APOA4P06727 396 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 PRKAR1AP10644 381 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 ITGB6P18564 788 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 PAMP19021 973 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 MGAT1P26572 445 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 PRDX3P30048 256 aaKnown RBP12.01□□□□□ -0.49
SS18-225ENST00000585121 SHMT2P34897 504 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 VPS41P49754 854 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 TERF1P54274 439 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 CSE1LP55060 971 aaKnown RBP12.01□□□□□ -0.49
SS18-225ENST00000585121 CRADDP78560 199 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 HSPA14Q0VDF9 509 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 LINC00303Q3SY05 128 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 DNAJC21Q5F1R6 531 aaKnown RBP12.01□□□□□ -0.49
SS18-225ENST00000585121 ARMC3Q5W041 872 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 MRNIPQ6NTE8 343 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 PWWP2BQ6NUJ5 590 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 C16orf46Q6P387 395 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 LRRC6Q86X45 466 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 TMEM126BQ8IUX1 230 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 EXD3Q8N9H8 876 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 OR5AR1Q8NGP9 310 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 OR5K2Q8NHB8 316 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 GRK7Q8WTQ7 553 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 STARD8Q92502 1023 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 PANX3Q96QZ0 392 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 KIFC1Q9BW19 673 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 AP1M1Q9BXS5 423 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 XKR8Q9H6D3 395 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 SAMD15Q9P1V8 674 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 GNPTGQ9UJJ9 305 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 CROTQ9UKG9 612 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 PIPSLA2A3N6 862 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 BTN3A3O00478 584 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 KPNA5O15131 536 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 NKX2-8O15522 239 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 CPNE3O75131 537 aaKnown RBP12.01□□□□□ -0.49
SS18-225ENST00000585121 SCRG1O75711 98 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 ACADLP28330 430 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 COILP38432 576 aaPredicted RBP12.01□□□□□ -0.49
SS18-225ENST00000585121 CCR10P46092 362 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 CASC4Q6P4E1 433 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 FBXO38Q6PIJ6 1188 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 NAPRTQ6XQN6 538 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 N4BP2L2Q92802 583 aaPredicted RBP12.01□□□□□ -0.49
SS18-225ENST00000585121 RNF31Q96EP0 1072 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 MS4A14Q96JA4 679 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 SEMA4CQ9C0C4 833 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 KCNF1Q9H3M0 494 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 LHX9Q9NQ69 397 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 LATS2Q9NRM7 1088 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 TREX1Q9NSU2 369 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 SYBUQ9NX95 663 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 ACTR10Q9NZ32 417 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 OR6C2Q9NZP2 312 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 IL17BQ9UHF5 180 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 SERTAD3Q9UJW9 196 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 SOX13Q9UN79 622 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 HEMK1Q9Y5R4 338 aaPredicted RBP12.01□□□□□ -0.49
SS18-225ENST00000585121 SPTA1P02549 2419 aa12.01□□□□□ -0.49
SS18-225ENST00000585121 MAGEB16A2A368 324 aa12□□□□□ -0.49
SS18-225ENST00000585121 C21orf140B9A014 251 aa12□□□□□ -0.49
SS18-225ENST00000585121 BHMG1C9JSJ3 638 aaPredicted RBP12□□□□□ -0.49
SS18-225ENST00000585121 VAPBO95292 243 aa12□□□□□ -0.49
SS18-225ENST00000585121 NTRK1P04629 796 aa12□□□□□ -0.49
SS18-225ENST00000585121 KLK3P07288 261 aaPredicted RBP12□□□□□ -0.49
SS18-225ENST00000585121 FAM87AP0C7U9 286 aa12□□□□□ -0.49
SS18-225ENST00000585121 CYP2A7P20853 494 aa12□□□□□ -0.49
SS18-225ENST00000585121 NMBRP28336 390 aa12□□□□□ -0.49
SS18-225ENST00000585121 CCR7P32248 378 aa12□□□□□ -0.49
SS18-225ENST00000585121 CDC20Q12834 499 aa12□□□□□ -0.49
SS18-225ENST00000585121 SEMA3AQ14563 771 aa12□□□□□ -0.49
SS18-225ENST00000585121 KCNJ11Q14654 390 aa12□□□□□ -0.49
SS18-225ENST00000585121 GPR19Q15760 415 aa12□□□□□ -0.49
SS18-225ENST00000585121 CRTC2Q53ET0 693 aaPredicted RBP12□□□□□ -0.49
SS18-225ENST00000585121 RNF187Q5TA31 235 aaPredicted RBP12□□□□□ -0.49
SS18-225ENST00000585121 TTC23LQ6PF05 361 aa12□□□□□ -0.49
SS18-225ENST00000585121 CCDC137Q6PK04 289 aaKnown RBP12□□□□□ -0.49
SS18-225ENST00000585121 SPESP1Q6UW49 350 aa12□□□□□ -0.49
SS18-225ENST00000585121 UNC5AQ6ZN44 842 aa12□□□□□ -0.49
SS18-225ENST00000585121 LDB1Q86U70 411 aaPredicted RBP12□□□□□ -0.49
SS18-225ENST00000585121 REXO1L1PQ8IX06 675 aa12□□□□□ -0.49
SS18-225ENST00000585121 SLC22A15Q8IZD6 547 aa12□□□□□ -0.49
SS18-225ENST00000585121 ADGRF3Q8IZF5 1079 aa12□□□□□ -0.49
SS18-225ENST00000585121 SLC35F6Q8N357 371 aa12□□□□□ -0.49
SS18-225ENST00000585121 CFAP61Q8NHU2 1237 aa12□□□□□ -0.49
SS18-225ENST00000585121 ZNF501Q96CX3 271 aaPredicted RBP12□□□□□ -0.49
SS18-225ENST00000585121 PPM1MQ96MI6 270 aa12□□□□□ -0.49
SS18-225ENST00000585121 FAM117AQ9C073 453 aa12□□□□□ -0.49
SS18-225ENST00000585121 SLC7A5P2Q9GIP4 190 aa12□□□□□ -0.49
SS18-225ENST00000585121 ADNPQ9H2P0 1102 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms