RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 HGH1Q9BTY7 390 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 PARD6BQ9BYG5 372 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 OR52A5Q9H2C5 316 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 EPB41L1Q9H4G0 881 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 CCDC86Q9H6F5 360 aaKnown RBP13.53□□□□□ -0.24
TRAF4-215ENST00000584944 SCHIP1Q9P0W5 487 aaPredicted RBP13.53□□□□□ -0.24
TRAF4-215ENST00000584944 KLHL42Q9P2K6 505 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 DHRS7Q9Y394 339 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 URB1O60287 2271 aaKnown RBP13.53□□□□□ -0.24
TRAF4-215ENST00000584944 CXorf49A8MYA2 514 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-215ENST00000584944 RIPK2O43353 540 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 SLCO2B1O94956 709 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 CATP04040 527 aaKnown RBP13.52□□□□□ -0.25
TRAF4-215ENST00000584944 ABHD2P08910 425 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 BRAFP15056 766 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 STMN1P16949 149 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 CCNFP41002 786 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 SLC19A1P41440 591 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 SERPINB9P50453 376 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 GPLD1P80108 840 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 IFFO1Q0D2I5 559 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 PRKAA1Q13131 559 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 COL9A2Q14055 689 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-215ENST00000584944 GPR18Q14330 331 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 RBM20Q5T481 1227 aaKnown RBP13.52□□□□□ -0.25
TRAF4-215ENST00000584944 ZNF549Q6P9A3 640 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 UNC5DQ6UXZ4 953 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 TMEM26Q6ZUK4 368 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 ZNF761Q86XN6 746 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-215ENST00000584944 TBC1D21Q8IYX1 336 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 CNPY4Q8N129 248 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 PHC3Q8NDX5 983 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 ACVR1CQ8NER5 493 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 ZFPM2Q8WW38 1151 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 SRMSQ9H3Y6 488 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 SYTL2Q9HCH5 934 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 SLC40A1Q9NP59 571 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 ZNF624Q9P2J8 865 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-215ENST00000584944 RABGEF1Q9UJ41 708 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 TLK1Q9UKI8 766 aa13.52□□□□□ -0.25
TRAF4-215ENST00000584944 EIF3FO00303 357 aaPredicted RBP13.51□□□□□ -0.25
TRAF4-215ENST00000584944 PPM1DO15297 605 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 OPA1O60313 960 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 UBXN7O94888 489 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 MYBL2P10244 700 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 GABRB3P28472 473 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 CLCN7P51798 805 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 LIMK2P53671 638 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 EPHA4P54764 986 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 CDKN2DP55273 166 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 OR1D5P58170 312 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 UBE2IP63279 158 aaKnown RBP13.51□□□□□ -0.25
TRAF4-215ENST00000584944 PRKG2Q13237 762 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 SLC29A2Q14542 456 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 EFTUD2Q15029 972 aaKnown RBP eCLIP13.51□□□□□ -0.251e-9■■■■■ 40.1
TRAF4-215ENST00000584944 TAF1BQ53T94 588 aaPredicted RBP13.51□□□□□ -0.25
TRAF4-215ENST00000584944 PERM1Q5SV97 790 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 CAPRIN2Q6IMN6 1127 aaKnown RBP13.51□□□□□ -0.25
TRAF4-215ENST00000584944 DUS1LQ6P1R4 473 aaKnown RBP13.51□□□□□ -0.25
TRAF4-215ENST00000584944 DHRS13Q6UX07 377 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 RBM44Q6ZP01 1051 aaKnown RBP13.51□□□□□ -0.25
TRAF4-215ENST00000584944 SPRED1Q7Z699 444 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 PIM3Q86V86 326 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 DCUN1D3Q8IWE4 304 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 CPNE9Q8IYJ1 553 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 GALNT15Q8N3T1 639 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 NKAPQ8N5F7 415 aaKnown RBP13.51□□□□□ -0.25
TRAF4-215ENST00000584944 MDM1Q8TC05 714 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 CD200R1Q8TD46 325 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 NCSTNQ92542 709 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 LINGO1Q96FE5 620 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 TSNARE1Q96NA8 513 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 PAFAH2Q99487 392 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 DPYSL5Q9BPU6 564 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 TRIM54Q9BYV2 358 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 LRRN3Q9H3W5 708 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 KIR3DX1Q9H7L2 352 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 UCK1Q9HA47 277 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 GPAMQ9HCL2 828 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 AKAP7Q9P0M2 348 aaPredicted RBP13.51□□□□□ -0.25
TRAF4-215ENST00000584944 DKK4Q9UBT3 224 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 LNPEPQ9UIQ6 1025 aa13.51□□□□□ -0.25
TRAF4-215ENST00000584944 COL5A1P20908 1838 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-215ENST00000584944 LY6G6EA0A0G2JKS1 128 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 LILRA5A6NI73 299 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 PRR19A6NJB7 356 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 MAP3K7O43318 606 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 ZBTB14O43829 449 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 GPC4O75487 556 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 CPNE6O95741 557 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 SYF2O95926 243 aaKnown RBP13.5□□□□□ -0.25
TRAF4-215ENST00000584944 ITGA2BP08514 1039 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 HIST1H2AGP0C0S8 130 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-215ENST00000584944 JUPP14923 745 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 HIST1H2ADP20671 130 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 CYP2A7P20853 494 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 CNTFP26441 200 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 CCL7P80098 99 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 ACSBG2Q5FVE4 666 aa13.5□□□□□ -0.25
TRAF4-215ENST00000584944 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms