RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 P2RY12Q9H244 342 aa17.34■□□□□ 0.37
ERBB2-221ENST00000584888 ASH1LQ9NR48 2969 aaKnown RBP17.34■□□□□ 0.37
ERBB2-221ENST00000584888 BOD1L1Q8NFC6 3051 aa17.34■□□□□ 0.37
ERBB2-221ENST00000584888 MYO18BQ8IUG5 2567 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 IGHV5-51A0A0C4DH38 117 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 FANCGO15287 622 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 GPC4O75487 556 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 NELFEP18615 380 aaKnown RBP17.33■□□□□ 0.36
ERBB2-221ENST00000584888 TCN2P20062 427 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 F8A1P23610 371 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 CCR7P32248 378 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 TTPAP49638 278 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 TERF1P54274 439 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 GNG11P61952 73 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 PLOD1Q02809 727 aaPredicted RBP17.33■□□□□ 0.36
ERBB2-221ENST00000584888 PLCL1Q15111 1095 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 DEFB109BQ30KR1 87 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 CRTC2Q53ET0 693 aaPredicted RBP17.33■□□□□ 0.36
ERBB2-221ENST00000584888 AARS2Q5JTZ9 985 aaKnown RBP17.33■□□□□ 0.36
ERBB2-221ENST00000584888 C16orf46Q6P387 395 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 ZNF449Q6P9G9 518 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 CES3Q6UWW8 571 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 PTRH1Q86Y79 214 aaKnown RBP17.33■□□□□ 0.36
ERBB2-221ENST00000584888 RASGRP3Q8IV61 690 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 AGGF1Q8N302 714 aaeCLIP17.33■□□□□ 0.36
ERBB2-221ENST00000584888 GALNT6Q8NCL4 622 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 PHC3Q8NDX5 983 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 LKAAEAR1Q8TD35 194 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 ELMO1Q92556 727 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 TFGQ92734 400 aaPredicted RBP17.33■□□□□ 0.36
ERBB2-221ENST00000584888 FERD3LQ96RJ6 166 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 CD180Q99467 661 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 TWSG1Q9GZX9 223 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 TFB2MQ9H5Q4 396 aaKnown RBP17.33■□□□□ 0.36
ERBB2-221ENST00000584888 XAB2Q9HCS7 855 aaKnown RBP17.33■□□□□ 0.36
ERBB2-221ENST00000584888 KCND1Q9NSA2 647 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 HRASLS2Q9NWW9 162 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 PCYOX1Q9UHG3 505 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 CDYLQ9Y232 598 aa17.33■□□□□ 0.36
ERBB2-221ENST00000584888 MRPS18BQ9Y676 258 aaKnown RBP17.33■□□□□ 0.36
ERBB2-221ENST00000584888 SPTBP11277 2137 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 GOLGA6L10A0A0M3HER8 536 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 OR6C74A6NCV1 312 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 IFRD1O00458 451 aaPredicted RBP17.32■□□□□ 0.36
ERBB2-221ENST00000584888 PRMT5O14744 637 aaPredicted RBP17.32■□□□□ 0.36
ERBB2-221ENST00000584888 SPAG6O75602 509 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 KIAA0754O94854 1291 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 VAPBO95292 243 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 FGF5P12034 268 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 RPS3P23396 243 aaKnown RBP eCLIP17.32■□□□□ 0.36
ERBB2-221ENST00000584888 IVDP26440 423 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 DLSTP36957 453 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 PTGIRP43119 386 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 ATP1A1-AS1Q5TC04 95 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 KIAA0930Q6ICG6 404 aaPredicted RBP17.32■□□□□ 0.36
ERBB2-221ENST00000584888 NAPRTQ6XQN6 538 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 APOBEC4Q8WW27 367 aaKnown RBP17.32■□□□□ 0.36
ERBB2-221ENST00000584888 UBXN4Q92575 508 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 SIGLEC10Q96LC7 697 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 SERPINB12Q96P63 405 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 NRTNQ99748 197 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 MAP3K3Q99759 626 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 DDX47Q9H0S4 455 aaKnown RBP17.32■□□□□ 0.36
ERBB2-221ENST00000584888 ANAPC5Q9UJX4 755 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 CROTQ9UKG9 612 aa17.32■□□□□ 0.36
ERBB2-221ENST00000584888 FAM237BA0A1B0GVD1 139 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 MAGEB16A2A368 324 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 SDR42E2A6NKP2 422 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 F8W8V4 182 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 TPBGLP0DKB5 382 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 AOAHP28039 575 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 KPNA2P52292 529 aaKnown RBP17.31■□□□□ 0.36
ERBB2-221ENST00000584888 KRT33BQ14525 404 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 BRD3Q15059 726 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 TYSND1Q2T9J0 566 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.31■□□□□ 0.36
ERBB2-221ENST00000584888 RNASEH2BQ5TBB1 312 aaKnown RBP17.31■□□□□ 0.36
ERBB2-221ENST00000584888 TMEM135Q86UB9 458 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 OOSP2Q86WS3 158 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 PPP1R3BQ86XI6 285 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 KMT5CQ86Y97 462 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 CARFQ8N187 725 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 OR4E2Q8NGC2 313 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 OR52E1Q8NGJ3 308 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 STAMBPL1Q96FJ0 436 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 NAPGQ99747 312 aaPredicted RBP17.31■□□□□ 0.36
ERBB2-221ENST00000584888 TRIM56Q9BRZ2 755 aaKnown RBP17.31■□□□□ 0.36
ERBB2-221ENST00000584888 LNPEPQ9UIQ6 1025 aa17.31■□□□□ 0.36
ERBB2-221ENST00000584888 SNRNP200O75643 2136 aaKnown RBP17.3■□□□□ 0.36
ERBB2-221ENST00000584888 TLCD2A6NGC4 264 aa17.3■□□□□ 0.36
ERBB2-221ENST00000584888 IQCF5A8MTL0 148 aa17.3■□□□□ 0.36
ERBB2-221ENST00000584888 BTN3A3O00478 584 aa17.3■□□□□ 0.36
ERBB2-221ENST00000584888 SLCO2B1O94956 709 aa17.3■□□□□ 0.36
ERBB2-221ENST00000584888 POLR2CP19387 275 aaPredicted RBP17.3■□□□□ 0.36
ERBB2-221ENST00000584888 PTK6Q13882 451 aa17.3■□□□□ 0.36
ERBB2-221ENST00000584888 KCNAB1Q14722 419 aa17.3■□□□□ 0.36
ERBB2-221ENST00000584888 ANKRD20A4Q4UJ75 823 aa17.3■□□□□ 0.36
ERBB2-221ENST00000584888 LRRC6Q86X45 466 aa17.3■□□□□ 0.36
ERBB2-221ENST00000584888 VRK3Q8IV63 474 aa17.3■□□□□ 0.36
ERBB2-221ENST00000584888 PPIL6Q8IXY8 311 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms