RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 RPS6KL1Q9Y6S9 549 aa12.77□□□□□ -0.37
ERBB2-220ENST00000584684 TCRBV7S3A2A0A539 114 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 C2orf74A8MZ97 194 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 BTN3A3O00478 584 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 KIF5CO60282 957 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 KDM1AO60341 852 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 GPC4O75487 556 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 KIAA0754O94854 1291 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 SLCO2B1O94956 709 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 TIAF1O95411 115 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 POLR2CP19387 275 aaPredicted RBP12.76□□□□□ -0.37
ERBB2-220ENST00000584684 MGAT1P26572 445 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 NMBRP28336 390 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 PRDX3P30048 256 aaKnown RBP12.76□□□□□ -0.37
ERBB2-220ENST00000584684 CCR7P32248 378 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 COILP38432 576 aaPredicted RBP12.76□□□□□ -0.37
ERBB2-220ENST00000584684 ARCN1P48444 511 aaKnown RBP12.76□□□□□ -0.37
ERBB2-220ENST00000584684 FNTAP49354 379 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 ADARP55265 1226 aaKnown RBP12.76□□□□□ -0.37
ERBB2-220ENST00000584684 LY6DQ14210 128 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 TBR1Q16650 682 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 TMTC4Q5T4D3 741 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 RNF187Q5TA31 235 aaPredicted RBP12.76□□□□□ -0.37
ERBB2-220ENST00000584684 KIAA0930Q6ICG6 404 aaPredicted RBP12.76□□□□□ -0.37
ERBB2-220ENST00000584684 PWWP2BQ6NUJ5 590 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 ADGRF3Q8IZF5 1079 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 SLC35F6Q8N357 371 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 GALNT6Q8NCL4 622 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 PHC3Q8NDX5 983 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 MCUQ8NE86 351 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 OR5AR1Q8NGP9 310 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 ASZ1Q8WWH4 475 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 STARD8Q92502 1023 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 CPT1BQ92523 772 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 EXTL1Q92935 676 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 MAGOHBQ96A72 148 aaKnown RBP12.76□□□□□ -0.37
ERBB2-220ENST00000584684 ZNF501Q96CX3 271 aaPredicted RBP12.76□□□□□ -0.37
ERBB2-220ENST00000584684 MS4A14Q96JA4 679 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 OSBPL9Q96SU4 736 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 AP1M1Q9BXS5 423 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 SEMA4CQ9C0C4 833 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 CHRNA10Q9GZZ6 450 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 XAB2Q9HCS7 855 aaKnown RBP12.76□□□□□ -0.37
ERBB2-220ENST00000584684 OR6C2Q9NZP2 312 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 LNPEPQ9UIQ6 1025 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 GNPTGQ9UJJ9 305 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 SNX12Q9UMY4 172 aa12.76□□□□□ -0.37
ERBB2-220ENST00000584684 GOLGA6L10A0A0M3HER8 536 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 GSAPA4D1B5 854 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 C21orf140B9A014 251 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 CPNE3O75131 537 aaKnown RBP12.75□□□□□ -0.37
ERBB2-220ENST00000584684 PHF2O75151 1096 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 TMEM63AO94886 807 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 RECKO95980 971 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 KRT14P02533 472 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 RPN2P04844 631 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 APOA4P06727 396 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 SFTPCP11686 197 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 CDH3P22223 829 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 AOAHP28039 575 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 MAGEA3P43357 314 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 CYP4F2P78329 520 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 CDC20Q12834 499 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 TMED2Q15363 201 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 TRIP13Q15645 432 aaPredicted RBP12.75□□□□□ -0.37
ERBB2-220ENST00000584684 MRNIPQ6NTE8 343 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 BORAQ6PGQ7 559 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 CCDC137Q6PK04 289 aaKnown RBP12.75□□□□□ -0.37
ERBB2-220ENST00000584684 SPESP1Q6UW49 350 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 UNC5DQ6UXZ4 953 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 ZNF517Q6ZMY9 492 aaPredicted RBP12.75□□□□□ -0.37
ERBB2-220ENST00000584684 CAND1Q86VP6 1230 aaKnown RBP12.75□□□□□ -0.37
ERBB2-220ENST00000584684 UNC5BQ8IZJ1 945 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 EXD3Q8N9H8 876 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 LKAAEAR1Q8TD35 194 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 COG1Q8WTW3 980 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 MFSD3Q96ES6 412 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 ELMO2Q96JJ3 720 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 PDLIM2Q96JY6 352 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 PPM1MQ96MI6 270 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 LRFN5Q96NI6 719 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 PANX3Q96QZ0 392 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 TCF12Q99081 682 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 ADNPQ9H2P0 1102 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 FANCEQ9HB96 536 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 SOHLH2Q9NX45 425 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 ACTR10Q9NZ32 417 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 IL17BQ9UHF5 180 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 TUBD1Q9UJT1 453 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 KCND3Q9UK17 655 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 PCDHB3Q9Y5E6 796 aa12.75□□□□□ -0.37
ERBB2-220ENST00000584684 TENM4Q6N022 2769 aa12.74□□□□□ -0.37
ERBB2-220ENST00000584684 BSNQ9UPA5 3926 aa12.74□□□□□ -0.37
ERBB2-220ENST00000584684 FAM237BA0A1B0GVD1 139 aa12.74□□□□□ -0.37
ERBB2-220ENST00000584684 PIPSLA2A3N6 862 aa12.74□□□□□ -0.37
ERBB2-220ENST00000584684 SLC9B1P1A6NJY1 282 aa12.74□□□□□ -0.37
ERBB2-220ENST00000584684 KPNA5O15131 536 aa12.74□□□□□ -0.37
ERBB2-220ENST00000584684 VAPBO95292 243 aa12.74□□□□□ -0.37
ERBB2-220ENST00000584684 CHRM5P08912 532 aaPredicted RBP12.74□□□□□ -0.37
ERBB2-220ENST00000584684 TPBGLP0DKB5 382 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms