RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 DUS1LQ6P1R4 473 aaKnown RBP9.3□□□□□ -0.92
RFFL-210ENST00000582308 OGFOD3Q6PK18 319 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 SBSNQ6UWP8 590 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 UNC5DQ6UXZ4 953 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 LCA5Q86VQ0 697 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 NAGSQ8N159 534 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 TMEM151AQ8N4L1 468 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 GOLGA6L1Q8N7Z2 621 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 ZDHHC1Q8WTX9 485 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 KIAA1191Q96A73 305 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 ALKBH8Q96BT7 664 aaKnown RBP9.3□□□□□ -0.92
RFFL-210ENST00000582308 APOPT1Q96IL0 206 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 PKNOX2Q96KN3 472 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 SMC6Q96SB8 1091 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 C12orf65Q9H3J6 166 aaKnown RBP9.3□□□□□ -0.92
RFFL-210ENST00000582308 TFB2MQ9H5Q4 396 aaKnown RBP9.3□□□□□ -0.92
RFFL-210ENST00000582308 ALG9Q9H6U8 611 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 RXFP3Q9NSD7 469 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 SEMA4GQ9NTN9 838 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 MKS1Q9NXB0 559 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 TMEM216Q9P0N5 145 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 RAPGEFL1Q9UHV5 662 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 DOLKQ9UPQ8 538 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 PDE10AQ9Y233 779 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 PLLPQ9Y342 182 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 HCN4Q9Y3Q4 1203 aa9.3□□□□□ -0.92
RFFL-210ENST00000582308 KRT87PA6NCN2 255 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 NEMP2A6NFY4 417 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 OR5K4A6NMS3 321 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 HMGB1P1B2RPK0 211 aaPredicted RBP9.29□□□□□ -0.92
RFFL-210ENST00000582308 B4DGG1 531 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 TARM1B6A8C7 271 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 H3BQF6 201 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 IFRD1O00458 451 aaPredicted RBP9.29□□□□□ -0.92
RFFL-210ENST00000582308 TRIM38O00635 465 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 CDX4O14627 284 aaPredicted RBP9.29□□□□□ -0.92
RFFL-210ENST00000582308 SLC16A5O15375 505 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 PRPF4O43172 522 aaKnown RBP eCLIP9.29□□□□□ -0.92
RFFL-210ENST00000582308 PCDHGA12O60330 932 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 GLRA3O75311 464 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 C1orf105O95561 183 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 C8GP07360 202 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 SBK3P0C264 359 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 ZNF883P0CG24 379 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 MTHFD1P11586 935 aaKnown RBP9.29□□□□□ -0.92
RFFL-210ENST00000582308 RPA3P35244 121 aaPredicted RBP9.29□□□□□ -0.92
RFFL-210ENST00000582308 HALP42357 657 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 BDKRB1P46663 353 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 CCT5P48643 541 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 ACAP2Q15057 778 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 PHKG1Q16816 387 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 PPP1R3AQ16821 1122 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 TSNAXIP1Q2TAA8 658 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 CCSMST1Q4G0I0 132 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 TECRLQ5HYJ1 363 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.29□□□□□ -0.92
RFFL-210ENST00000582308 KLC3Q6P597 504 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 UBE2R2Q712K3 238 aaPredicted RBP9.29□□□□□ -0.92
RFFL-210ENST00000582308 C17orf82Q86X59 251 aaPredicted RBP9.29□□□□□ -0.92
RFFL-210ENST00000582308 SFRP1Q8N474 314 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 OR5AR1Q8NGP9 310 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 SLC37A2Q8TED4 501 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 SCYL1Q96KG9 808 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 FOPNLQ96NB1 174 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 FERD3LQ96RJ6 166 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 ATOH8Q96SQ7 321 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 SLC12A9Q9BXP2 914 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 PARVBQ9HBI1 364 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 SSU72Q9NP77 194 aaKnown RBP9.29□□□□□ -0.92
RFFL-210ENST00000582308 IMP3Q9NV31 184 aaKnown RBP9.29□□□□□ -0.92
RFFL-210ENST00000582308 DNAAF2Q9NVR5 837 aaKnown RBP9.29□□□□□ -0.92
RFFL-210ENST00000582308 NLGN3Q9NZ94 848 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 SIRPGQ9P1W8 387 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 SLC17A7Q9P2U7 560 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 CPNE7Q9UBL6 633 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 GRID1Q9ULK0 1009 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 ASF1AQ9Y294 204 aa9.29□□□□□ -0.92
RFFL-210ENST00000582308 PTPRZ1P23471 2315 aaPredicted RBP9.28□□□□□ -0.92
RFFL-210ENST00000582308 KIR2DS5A0A0G2JLQ3 304 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 A0A0G2JNG1 304 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 CCDC189A1A4V9 331 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 KIR2DS3K7RE56 304 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 TK2O00142 265 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 PLIN3O60664 434 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 KERAO60938 352 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 CATP04040 527 aaKnown RBP9.28□□□□□ -0.92
RFFL-210ENST00000582308 PROCP04070 461 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 RBP1P09455 135 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 TPBGLP0DKB5 382 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 MTHFD2P13995 350 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 SLC2A4P14672 509 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 XRCC1P18887 633 aaPredicted RBP9.28□□□□□ -0.92
RFFL-210ENST00000582308 MAPK9P45984 424 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 ATXN3P54252 364 aaPredicted RBP9.28□□□□□ -0.92
RFFL-210ENST00000582308 MAZP56270 477 aaKnown RBP9.28□□□□□ -0.92
RFFL-210ENST00000582308 UBE2IP63279 158 aaKnown RBP9.28□□□□□ -0.92
RFFL-210ENST00000582308 NHLH1Q02575 133 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 PRKG2Q13237 762 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 SP140Q13342 867 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 GRB7Q14451 532 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms