RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 RASGEF1AQ8N9B8 481 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 FBXO27Q8NI29 283 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 HM13Q8TCT9 377 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 SLC26A7Q8TE54 656 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 WDR60Q8WVS4 1066 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 MYLIPQ8WY64 445 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 METTL2AQ96IZ6 378 aaKnown RBP10.88□□□□□ -0.67
SKA2-204ENST00000578519 HIC2Q96JB3 615 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 LINC00615Q96LM1 132 aaPredicted RBP10.88□□□□□ -0.67
SKA2-204ENST00000578519 C3orf30Q96M34 536 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 KCNA7Q96RP8 456 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 MYADMQ96S97 322 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 NPAS2Q99743 824 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 P2RY13Q9BPV8 354 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 EFHD1Q9BUP0 239 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 MUC13Q9H3R2 512 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 TUBB1Q9H4B7 451 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 MTG2Q9H4K7 406 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 ELOVL6Q9H5J4 265 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 S100A14Q9HCY8 104 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 HEBP1Q9NRV9 189 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 NMRK1Q9NWW6 199 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 CACNA2D2Q9NY47 1150 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 SUCOQ9UBS9 1254 aaKnown RBP10.88□□□□□ -0.67
SKA2-204ENST00000578519 TMPRSS11EQ9UL52 423 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 SCML1Q9UN30 329 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 C15orf41Q9Y2V0 281 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 TMED5Q9Y3A6 229 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 L3MBTL1Q9Y468 752 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 FADS3Q9Y5Q0 445 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 GPR45Q9Y5Y3 372 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 NOTCH4Q99466 2003 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 ZNF106Q9H2Y7 1883 aaKnown RBP10.87□□□□□ -0.67
SKA2-204ENST00000578519 A0A1W2PP18 115 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 SLC5A10A0PJK1 596 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 OR2AG2A6NM03 316 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 FADS2P1A8MWK0 482 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 MANBAO00462 879 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 NR5A2O00482 541 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 MMP20O60882 483 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 DNAJA2O60884 412 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 KCNJ13O60928 360 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 KRT36O76013 467 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 BAG2O95816 211 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 SLC2A4P14672 509 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 ANPEPP15144 967 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 GNAZP19086 355 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 CA5AP35218 305 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 HNF4AP41235 474 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 POLR2JP52435 117 aaKnown RBP10.87□□□□□ -0.67
SKA2-204ENST00000578519 ABRQ12979 859 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 TRAF3Q13114 568 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 FLOT2Q14254 428 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 GRB7Q14451 532 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 HIST2H2ACQ16777 129 aaPredicted RBP10.87□□□□□ -0.67
SKA2-204ENST00000578519 AP5B1Q2VPB7 878 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 POM121L1PQ3SYA9 428 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 PIGGQ5H8A4 983 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 HIST2H2AA3Q6FI13 130 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 LETMD1Q6P1Q0 360 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 PAOXQ6QHF9 649 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 BLOC1S3Q6QNY0 202 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 LPCAT2Q7L5N7 544 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 TRIM46Q7Z4K8 759 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 TMEM126BQ8IUX1 230 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 KLHDC8AQ8IYD2 350 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 SLC22A15Q8IZD6 547 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 RAB42Q8N4Z0 105 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 MINDY1Q8N5J2 469 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 ZNF513Q8N8E2 541 aaPredicted RBP10.87□□□□□ -0.67
SKA2-204ENST00000578519 L3MBTL4Q8NA19 623 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 CATSPER1Q8NEC5 780 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 OR52B6Q8NGF0 335 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 POP5Q969H6 163 aaKnown RBP10.87□□□□□ -0.67
SKA2-204ENST00000578519 ESAMQ96AP7 390 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 REPS1Q96D71 796 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 SPDL1Q96EA4 605 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 CLPTM1LQ96KA5 538 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 LRGUKQ96M69 825 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 KXD1Q9BQD3 176 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 TMEM79Q9BSE2 394 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 KRTAP3-2Q9BYR7 98 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 RSPH9Q9H1X1 276 aaPredicted RBP10.87□□□□□ -0.67
SKA2-204ENST00000578519 S1PR5Q9H228 398 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 DPEP2Q9H4A9 486 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 C8orf33Q9H7E9 229 aaPredicted RBP10.87□□□□□ -0.67
SKA2-204ENST00000578519 ITM2CQ9NQX7 267 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 ASIC5Q9NY37 505 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 GPRC5BQ9NZH0 403 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 KLQ9UEF7 1012 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 ZNF490Q9ULM2 529 aaPredicted RBP10.87□□□□□ -0.67
SKA2-204ENST00000578519 NCKAP1Q9Y2A7 1128 aa10.87□□□□□ -0.67
SKA2-204ENST00000578519 KANSL1LA0AUZ9 987 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 MGAT4DA6NG13 374 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 LOC730098B7Z3J9 87 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 INPP4BO15327 924 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 NVLO15381 856 aaKnown RBP10.86□□□□□ -0.67
SKA2-204ENST00000578519 GMNNO75496 209 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 BCAS2O75934 225 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms