RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 LMBRD1Q9NUN5 540 aa9.77□□□□□ -0.85
NPLOC4-220ENST00000576940 ACTR10Q9NZ32 417 aa9.77□□□□□ -0.85
NPLOC4-220ENST00000576940 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.77□□□□□ -0.85
NPLOC4-220ENST00000576940 FAM153AQ9UHL3 310 aa9.77□□□□□ -0.85
NPLOC4-220ENST00000576940 ITPR3Q14573 2671 aa9.77□□□□□ -0.85
NPLOC4-220ENST00000576940 LRRD1A4D1F6 860 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 C2orf74A8MZ97 194 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 APOL1O14791 398 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 JRKO75564 520 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 CD63P08962 238 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 PTMSP20962 102 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 ALAS2P22557 587 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 PDHA2P29803 388 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 GABRA4P48169 554 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 ART3Q13508 389 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 SLC14A2Q15849 920 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 NKAIN1Q4KMZ8 207 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 AGAP7PQ5VUJ5 663 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 PRAMEF13Q5VWM6 474 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 SLC9A4Q6AI14 798 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 LINC00696Q6ZRV3 163 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 AMIGO1Q86WK6 493 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 ITLN2Q8WWU7 325 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 RELTQ969Z4 430 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 AGAP4Q96P64 663 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 OLFM3Q96PB7 478 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 SLX1AQ9BQ83 275 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 CCM2Q9BSQ5 444 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 AP1M1Q9BXS5 423 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 TFB2MQ9H5Q4 396 aaKnown RBP9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 FAM96AQ9H5X1 160 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 CTTNBP2NLQ9P2B4 639 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 SAE1Q9UBE0 346 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 FBXL4Q9UKA2 621 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 PKP3Q9Y446 797 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 AP1M2Q9Y6Q5 423 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 MED13LQ71F56 2210 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 PKDREJQ9NTG1 2253 aa9.76□□□□□ -0.85
NPLOC4-220ENST00000576940 TACC2O95359 2948 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 DCHS2Q6V1P9 2916 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 C3orf70A6NLC5 250 aaPredicted RBP9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 STX7O15400 261 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 KLHL18O94889 574 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 PRAMEF1O95521 474 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 EPOP01588 193 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 NFKB1P19838 968 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 HTR1EP28566 365 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 DYNLT1P63172 113 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 TMPRSS15P98073 1019 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 OTUD4Q01804 1114 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 WASHC5Q12768 1159 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 PRKD1Q15139 912 aaPredicted RBP9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 TLR1Q15399 786 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 SLC1A5Q15758 541 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 STX1AQ16623 288 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 BCL7AQ4VC05 210 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 ALKBH5Q6P6C2 394 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 SPESP1Q6UW49 350 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 SHISA6Q6ZSJ9 500 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 MICALCLQ6ZW33 695 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 GDF7Q7Z4P5 450 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 MRGPRGQ86SM5 289 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 C19orf47Q8N9M1 422 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 IPMKQ8NFU5 416 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 OR1N1Q8NGS0 311 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 PROKR1Q8TCW9 393 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 RNF25Q96BH1 459 aaPredicted RBP9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 OXNAD1Q96HP4 312 aaPredicted RBP9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 OR52A5Q9H2C5 316 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 TXLNGQ9NUQ3 528 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 OLAHQ9NV23 265 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 SMOXQ9NWM0 555 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 IRAK4Q9NWZ3 460 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 SPHK1Q9NYA1 384 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 HACD3Q9P035 362 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 FKBPLQ9UIM3 349 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 CDC23Q9UJX2 597 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 KLF2Q9Y5W3 355 aaPredicted RBP9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 HEBP2Q9Y5Z4 205 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 ARL5AQ9Y689 179 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 CCDC168Q8NDH2 2452 aa9.75□□□□□ -0.85
NPLOC4-220ENST00000576940 TRGV8A0A0C4DH27 118 aa9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 SOCS6O14544 535 aa9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 PPP1R12AO14974 1030 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 ZSCAN9O15535 394 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 SRP72O76094 671 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 AGTP01019 485 aa9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 UGT2B7P16662 529 aa9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 MMP11P24347 488 aa9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 KRTAP10-9P60411 292 aa9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 XIAPP98170 497 aa9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 Q0VFX4 171 aa9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 MESDQ14696 234 aa9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 NR1I3Q14994 352 aa9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 FILIP1LQ4L180 1135 aa9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 B3GNTL1Q67FW5 361 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 ZNF324BQ6AW86 544 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 FAM180AQ6UWF9 173 aa9.74□□□□□ -0.85
NPLOC4-220ENST00000576940 KIRREL2Q6UWL6 708 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms