RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 QSOX1O00391 747 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 BTN3A1O00481 513 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 EIF3HO15372 352 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMG6-209ENST00000571442 CAPN5O15484 640 aaPredicted RBP6.79□□□□□ -1.32
SMG6-209ENST00000571442 TLX3O43711 291 aaPredicted RBP6.79□□□□□ -1.32
SMG6-209ENST00000571442 DUX1O43812 170 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 BRINP1O60477 761 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 PRAMEF10O60809 474 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 C9P02748 559 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 GSTM1P09488 218 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 FAM153BP0C7A2 387 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 POLR2CP19387 275 aaPredicted RBP6.79□□□□□ -1.32
SMG6-209ENST00000571442 CHRM3P20309 590 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 DEKP35659 375 aaKnown RBP6.79□□□□□ -1.32
SMG6-209ENST00000571442 PPARGP37231 505 aaPredicted RBP6.79□□□□□ -1.32
SMG6-209ENST00000571442 CAPZBP47756 277 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 CD151P48509 253 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 KPNA2P52292 529 aaKnown RBP6.79□□□□□ -1.32
SMG6-209ENST00000571442 GABREP78334 506 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 GPLD1P80108 840 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 GSTM4Q03013 218 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 MGAT5Q09328 741 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 COL9A2Q14055 689 aaPredicted RBP6.79□□□□□ -1.32
SMG6-209ENST00000571442 ZNF460Q14592 562 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 RTP5Q14D33 572 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 KLHL38Q2WGJ6 581 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 FAM153CQ494X1 144 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 SYTL3Q4VX76 610 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 PHF19Q5T6S3 580 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 RNF187Q5TA31 235 aaPredicted RBP6.79□□□□□ -1.32
SMG6-209ENST00000571442 HECTD2Q5U5R9 776 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 FOXR1Q6PIV2 292 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 FAM92BQ6ZTR7 304 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 PIWIL4Q7Z3Z4 852 aaKnown RBP6.79□□□□□ -1.32
SMG6-209ENST00000571442 ARHGAP22Q7Z5H3 698 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 ZC3HC1Q86WB0 502 aaKnown RBP6.79□□□□□ -1.32
SMG6-209ENST00000571442 RASGRP3Q8IV61 690 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 FAM20CQ8IXL6 584 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 CPNE9Q8IYJ1 553 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 ADGRF3Q8IZF5 1079 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 C2orf73Q8N5S3 287 aaPredicted RBP6.79□□□□□ -1.32
SMG6-209ENST00000571442 ZBTB2Q8N680 514 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 CEP112Q8N8E3 955 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 LINC01555Q8NAE3 123 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 MNS1Q8NEH6 495 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 OR4E2Q8NGC2 313 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 OR4D9Q8NGE8 314 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 OR10G6Q8NH81 332 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 CFAP61Q8NHU2 1237 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 CALML6Q8TD86 181 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 IFT81Q8WYA0 676 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 DLG3Q92796 817 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 TMEM159Q96B96 161 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 SH3KBP1Q96B97 665 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 LIN37Q96GY3 246 aaPredicted RBP6.79□□□□□ -1.32
SMG6-209ENST00000571442 TGM7Q96PF1 710 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 PANX3Q96QZ0 392 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 TTC1Q99614 292 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 NAT9Q9BTE0 207 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 TWSG1Q9GZX9 223 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 VPS37BQ9H9H4 285 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 ASCL3Q9NQ33 180 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 PPANQ9NQ55 473 aaKnown RBP6.79□□□□□ -1.32
SMG6-209ENST00000571442 SPHK1Q9NYA1 384 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 ASF1AQ9Y294 204 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 DHRS7Q9Y394 339 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 LOXL2Q9Y4K0 774 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 SDK2Q58EX2 2172 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 FREM2Q5SZK8 3169 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 SPTBP11277 2137 aa6.79□□□□□ -1.32
SMG6-209ENST00000571442 CCDC187A0A096LP49 1063 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 IGHV5-51A0A0C4DH38 117 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 OR6C74A6NCV1 312 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 ARHGEF33A8MVX0 844 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 IFRD1O00458 451 aaPredicted RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 WISP3O95389 354 aaPredicted RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 MATN4O95460 622 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 C1orf105O95561 183 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 TSPAN12O95859 305 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 APOA4P06727 396 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 FGF3P11487 239 aaPredicted RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 PVRP15151 417 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 AMD1P17707 334 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 FDXRP22570 491 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 MCM3P25205 808 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 SEPHS1P49903 392 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 YBX1P67809 324 aaKnown RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 SH3BP2P78314 561 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 CAV1Q03135 178 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 FASTKQ14296 549 aaKnown RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 KCNAB1Q14722 419 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 PLCL1Q15111 1095 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 KYNUQ16719 465 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 KBTBD12Q3ZCT8 623 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 GLE1Q53GS7 698 aaKnown RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 PLEKHS1Q5SXH7 462 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 TEX35Q5T0J7 233 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 IRGCQ6NXR0 463 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 WDR74Q6RFH5 385 aaPredicted RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 PAQR3Q6TCH7 311 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms