RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 SPARCL1Q14515 664 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 PLEKHS1Q5SXH7 462 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 MEI1Q5TIA1 1274 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 CPZQ66K79 652 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 DENND5AQ6IQ26 1287 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 CLEC18BQ6UXF7 455 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 SERPINA9Q86WD7 417 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 ENDOVQ8N8Q3 282 aaKnown RBP12.74□□□□□ -0.37
SPG7-221ENST00000569720 TTC13Q8NBP0 860 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 SLC38A9Q8NBW4 561 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 CLEC18CQ8NCF0 446 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 HES6Q96HZ4 224 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 FAM118BQ9BPY3 351 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 NLNQ9BYT8 704 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 OR52A5Q9H2C5 316 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 LRRC40Q9H9A6 602 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 RNF14Q9UBS8 474 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 VPS4AQ9UN37 437 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 ZNF451Q9Y4E5 1061 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 PCDHGB7Q9Y5F8 929 aa12.74□□□□□ -0.37
SPG7-221ENST00000569720 PRRC2CQ9Y520 2896 aaKnown RBP12.74□□□□□ -0.37
SPG7-221ENST00000569720 USP9YO00507 2555 aaPredicted RBP12.74□□□□□ -0.37
SPG7-221ENST00000569720 IGLV3-16A0A075B6K0 115 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 TRBV5-4A0A0C4DH59 114 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 H7C0S8 307 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 QSOX1O00391 747 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 BTN3A1O00481 513 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 CCL22O00626 93 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 DDX3YO15523 660 aaKnown RBP12.73□□□□□ -0.37
SPG7-221ENST00000569720 PSMD3O43242 534 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 LDB2O43679 373 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 PDGFAP04085 211 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 ST6GAL1P15907 406 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 PTGIRP43119 386 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 ITGA1P56199 1179 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 GNG11P61952 73 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 ABRQ12979 859 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 CHAF1BQ13112 559 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 LAMB3Q13751 1172 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 RPS6KA1Q15418 735 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 PARP6Q2NL67 630 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 AMIGO1Q86WK6 493 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 SYTL1Q8IYJ3 562 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 PHC3Q8NDX5 983 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 OR52E1Q8NGJ3 308 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 OR1L3Q8NH93 324 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 TFGQ92734 400 aaPredicted RBP12.73□□□□□ -0.37
SPG7-221ENST00000569720 N4BP2L2Q92802 583 aaPredicted RBP12.73□□□□□ -0.37
SPG7-221ENST00000569720 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.73□□□□□ -0.37
SPG7-221ENST00000569720 DNAJC1Q96KC8 554 aaKnown RBP12.73□□□□□ -0.37
SPG7-221ENST00000569720 DPH2Q9BQC3 489 aaPredicted RBP12.73□□□□□ -0.37
SPG7-221ENST00000569720 PITPNM3Q9BZ71 974 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 NLE1Q9NVX2 485 aaPredicted RBP12.73□□□□□ -0.37
SPG7-221ENST00000569720 TCFL5Q9UL49 500 aa12.73□□□□□ -0.37
SPG7-221ENST00000569720 USP9XQ93008 2570 aaPredicted RBP12.73□□□□□ -0.37
SPG7-221ENST00000569720 CTAGE9A4FU28 777 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 ESPNB1AK53 854 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 C9J4A7 227 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 E7EQ34 232 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 BTN3A3O00478 584 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 DPM1O60762 260 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 TMEM63AO94886 807 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 AP2A2O94973 939 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 TCP1P17987 556 aaKnown RBP12.72□□□□□ -0.37
SPG7-221ENST00000569720 AGXTP21549 392 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 PDHA2P29803 388 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 RORAP35398 523 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 NSG1P42857 185 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 LMAN1P49257 510 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 RRADP55042 308 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 CACNG1Q06432 222 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 PRKG2Q13237 762 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 P3H1Q32P28 736 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 PRAMEF17Q5VTA0 474 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 HPS6Q86YV9 775 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 KLHDC8BQ8IXV7 354 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 GPR135Q8IZ08 494 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 TMEM102Q8N9M5 508 aaPredicted RBP12.72□□□□□ -0.37
SPG7-221ENST00000569720 GALNT11Q8NCW6 608 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 CPT1CQ8TCG5 803 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 ADAMTS17Q8TE56 1095 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 STYXQ8WUJ0 223 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 PBKQ96KB5 322 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 TRAPPC9Q96Q05 1148 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 C17orf62Q9BQA9 187 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 HGH1Q9BTY7 390 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 MLXIPLQ9NP71 852 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 PCMTD2Q9NV79 361 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 SMARCAL1Q9NZC9 954 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 PADI2Q9Y2J8 665 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 CAPN6Q9Y6Q1 641 aa12.72□□□□□ -0.37
SPG7-221ENST00000569720 USP27XA6NNY8 438 aa12.71□□□□□ -0.37
SPG7-221ENST00000569720 F8W8V4 182 aa12.71□□□□□ -0.37
SPG7-221ENST00000569720 LIN7AO14910 233 aaPredicted RBP12.71□□□□□ -0.37
SPG7-221ENST00000569720 KDM1AO60341 852 aa12.71□□□□□ -0.37
SPG7-221ENST00000569720 FTH1P02794 183 aa12.71□□□□□ -0.37
SPG7-221ENST00000569720 TPH1P17752 444 aa12.71□□□□□ -0.37
SPG7-221ENST00000569720 CDKN1CP49918 316 aaPredicted RBP12.71□□□□□ -0.37
SPG7-221ENST00000569720 BOP1Q14137 746 aaKnown RBP12.71□□□□□ -0.37
SPG7-221ENST00000569720 POU6F1Q14863 301 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms