RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 TSSK1BQ9BXA7 367 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 TRIT1Q9H3H1 467 aaKnown RBP17.02■□□□□ 0.32
EDC3-215ENST00000569007 GPN2Q9H9Y4 310 aaPredicted RBP17.02■□□□□ 0.32
EDC3-215ENST00000569007 PDE7BQ9NP56 450 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 FGF21Q9NSA1 209 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 LNPEPQ9UIQ6 1025 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 RARRES3Q9UL19 164 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 ICKQ9UPZ9 632 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 CDYLQ9Y232 598 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 SLC9B1P1A6NJY1 282 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 MATN2O00339 956 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 TIAF1O95411 115 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 MLNP12872 115 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 CDH3P22223 829 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 PRDX3P30048 256 aaKnown RBP17.01■□□□□ 0.31
EDC3-215ENST00000569007 GNG11P61952 73 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 ACY1Q03154 408 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 ABHD18Q0P651 414 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 MAP7Q14244 749 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 PTRHD1Q6GMV3 140 aaKnown RBP17.01■□□□□ 0.31
EDC3-215ENST00000569007 C6orf15Q6UXA7 325 aaPredicted RBP17.01■□□□□ 0.31
EDC3-215ENST00000569007 VRK3Q8IV63 474 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 TBC1D21Q8IYX1 336 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 SLC22A15Q8IZD6 547 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 ADGRF3Q8IZF5 1079 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 ESX1Q8N693 406 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 GALNT6Q8NCL4 622 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 GRK7Q8WTQ7 553 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 ASZ1Q8WWH4 475 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 TRIM56Q9BRZ2 755 aaKnown RBP17.01■□□□□ 0.31
EDC3-215ENST00000569007 SLC12A9Q9BXP2 914 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 P2RY12Q9H244 342 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 XAB2Q9HCS7 855 aaKnown RBP17.01■□□□□ 0.31
EDC3-215ENST00000569007 SOHLH2Q9NX45 425 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 PYCARDQ9ULZ3 195 aa17.01■□□□□ 0.31
EDC3-215ENST00000569007 TDRKHQ9Y2W6 561 aaKnown RBP17.01■□□□□ 0.31
EDC3-215ENST00000569007 GPC4O75487 556 aa17■□□□□ 0.31
EDC3-215ENST00000569007 APOA4P06727 396 aa17■□□□□ 0.31
EDC3-215ENST00000569007 TPBGLP0DKB5 382 aa17■□□□□ 0.31
EDC3-215ENST00000569007 TCP1P17987 556 aaKnown RBP17■□□□□ 0.31
EDC3-215ENST00000569007 AOAHP28039 575 aa17■□□□□ 0.31
EDC3-215ENST00000569007 STAT5AP42229 794 aa17■□□□□ 0.31
EDC3-215ENST00000569007 LY6DQ14210 128 aa17■□□□□ 0.31
EDC3-215ENST00000569007 GPR19Q15760 415 aa17■□□□□ 0.31
EDC3-215ENST00000569007 DNAJC21Q5F1R6 531 aaKnown RBP17■□□□□ 0.31
EDC3-215ENST00000569007 ARMC3Q5W041 872 aa17■□□□□ 0.31
EDC3-215ENST00000569007 KIAA0930Q6ICG6 404 aaPredicted RBP17■□□□□ 0.31
EDC3-215ENST00000569007 MRNIPQ6NTE8 343 aa17■□□□□ 0.31
EDC3-215ENST00000569007 PWWP2BQ6NUJ5 590 aa17■□□□□ 0.31
EDC3-215ENST00000569007 SDCCAG8Q86SQ7 713 aaPredicted RBP17■□□□□ 0.31
EDC3-215ENST00000569007 LRRC6Q86X45 466 aa17■□□□□ 0.31
EDC3-215ENST00000569007 OR5K2Q8NHB8 316 aa17■□□□□ 0.31
EDC3-215ENST00000569007 EXTL1Q92935 676 aa17■□□□□ 0.31
EDC3-215ENST00000569007 SERPINB12Q96P63 405 aa17■□□□□ 0.31
EDC3-215ENST00000569007 DDX47Q9H0S4 455 aaKnown RBP17■□□□□ 0.31
EDC3-215ENST00000569007 C1GALT1Q9NS00 363 aa17■□□□□ 0.31
EDC3-215ENST00000569007 SAMD15Q9P1V8 674 aa17■□□□□ 0.31
EDC3-215ENST00000569007 POLG2Q9UHN1 485 aa17■□□□□ 0.31
EDC3-215ENST00000569007 GNPTGQ9UJJ9 305 aa17■□□□□ 0.31
EDC3-215ENST00000569007 BTRCQ9Y297 605 aa17■□□□□ 0.31
EDC3-215ENST00000569007 FAM237BA0A1B0GVD1 139 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 SDR42E2A6NKP2 422 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 C2orf74A8MZ97 194 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 ST6GAL1P15907 406 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 RPS3P23396 243 aaKnown RBP eCLIP16.99■□□□□ 0.31
EDC3-215ENST00000569007 SHMT2P34897 504 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 EIF3BP55884 814 aaKnown RBP16.99■□□□□ 0.31
EDC3-215ENST00000569007 TUBB4BP68371 445 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 ABRQ12979 859 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 TUBB2AQ13885 445 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 TMED2Q15363 201 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 PPP1R7Q15435 360 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 TYSND1Q2T9J0 566 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 ANKRD20A4Q4UJ75 823 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 TMTC4Q5T4D3 741 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 UNC5AQ6ZN44 842 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 BPHLQ86WA6 291 aaPredicted RBP16.99■□□□□ 0.31
EDC3-215ENST00000569007 NAT8LQ8N9F0 302 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 LPGAT1Q92604 370 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 STAMBPL1Q96FJ0 436 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 SLC45A3Q96JT2 553 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 PANX3Q96QZ0 392 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 TUBB2BQ9BVA1 445 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 PITPNM3Q9BZ71 974 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 ACTR10Q9NZ32 417 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 IL1RAPL1Q9NZN1 696 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 IL17BQ9UHF5 180 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 PLAGL1Q9UM63 463 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 RPS6KL1Q9Y6S9 549 aa16.99■□□□□ 0.31
EDC3-215ENST00000569007 MAGEB16A2A368 324 aa16.98■□□□□ 0.31
EDC3-215ENST00000569007 PIPSLA2A3N6 862 aa16.98■□□□□ 0.31
EDC3-215ENST00000569007 ZNF891A8MT65 544 aaPredicted RBP16.98■□□□□ 0.31
EDC3-215ENST00000569007 C1QL1O75973 258 aa16.98■□□□□ 0.31
EDC3-215ENST00000569007 SLCO2B1O94956 709 aa16.98■□□□□ 0.31
EDC3-215ENST00000569007 ITGB2P05107 769 aa16.98■□□□□ 0.31
EDC3-215ENST00000569007 PVRP15151 417 aa16.98■□□□□ 0.31
EDC3-215ENST00000569007 PAMP19021 973 aa16.98■□□□□ 0.31
EDC3-215ENST00000569007 MAGEA3P43357 314 aa16.98■□□□□ 0.31
EDC3-215ENST00000569007 DHX34Q14147 1143 aaKnown RBP16.98■□□□□ 0.31
EDC3-215ENST00000569007 CTSL3PQ5NE16 218 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms