RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 CHRNB1P11230 501 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 HNRNPFP52597 415 aaKnown RBP10.71□□□□□ -0.69
PALB2-206ENST00000568219 FKBP1AP62942 108 aaKnown RBP10.71□□□□□ -0.69
PALB2-206ENST00000568219 AAK1Q2M2I8 961 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 TIMM50Q3ZCQ8 353 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 CYP27C1Q4G0S4 372 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 TXNDC11Q6PKC3 985 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 AMIGO1Q86WK6 493 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 TRIM69Q86WT6 500 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 OR8H3Q8N146 312 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 C1GALT1C1Q96EU7 318 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 MMP27Q9H306 513 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 VAPAQ9P0L0 249 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 CRLS1Q9UJA2 301 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 M0R129 80 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 KRT6AP02538 564 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 KRT6BP04259 564 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 THP07101 528 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 FHP07954 510 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 ATXN8OSP0DMR3 200 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 PFKLP17858 780 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 POLR2EP19388 210 aaKnown RBP10.71□□□□□ -0.69
PALB2-206ENST00000568219 DCTP40126 519 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 GNPDA1P46926 289 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 HTR6P50406 440 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 HACD2Q6Y1H2 254 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 METTL4Q8N3J2 472 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 GPR78Q96P69 363 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 POLR1EQ9GZS1 481 aaKnown RBP10.71□□□□□ -0.69
PALB2-206ENST00000568219 OR51E2Q9H255 320 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 CLCA3PQ9Y6N3 262 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 ADAMTS7Q9UKP4 1686 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 I3L521 148 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 ACOX3O15254 700 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 TREHO43280 583 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 EPN2O95208 641 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 CRYZL1O95825 349 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 STSP08842 583 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 GSTM1P09488 218 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 IRF1P10914 325 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 COX7A2P14406 83 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 DPEP1P16444 411 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 HTR1EP28566 365 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 SPIBQ01892 262 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 GRSF1Q12849 480 aaKnown RBP eCLIP10.71□□□□□ -0.7
PALB2-206ENST00000568219 TSTQ16762 297 aaKnown RBP10.71□□□□□ -0.7
PALB2-206ENST00000568219 C18orf21Q32NC0 220 aaPredicted RBP10.71□□□□□ -0.7
PALB2-206ENST00000568219 BCL7AQ4VC05 210 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 Q6ZPB1 254 aaPredicted RBP10.71□□□□□ -0.7
PALB2-206ENST00000568219 PTCHD4Q6ZW05 846 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 CYP4Z1Q86W10 505 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 OSTM1Q86WC4 334 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 KRT73Q86Y46 540 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 SYT12Q8IV01 421 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 CCDC117Q8IWD4 279 aaPredicted RBP10.71□□□□□ -0.7
PALB2-206ENST00000568219 EEF1AKMT1Q8WVE0 214 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 PIK3R3Q92569 461 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 HMCESQ96FZ2 354 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 FAM193BQ96PV7 902 aaPredicted RBP10.71□□□□□ -0.7
PALB2-206ENST00000568219 EBPLQ9BY08 206 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 RNF167Q9H6Y7 350 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 NECTIN3Q9NQS3 549 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 PCDHGC4Q9Y5F7 938 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 PCDHGA10Q9Y5H3 936 aa10.71□□□□□ -0.7
PALB2-206ENST00000568219 A0A0U1RQS6 177 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 IFRD1O00458 451 aaPredicted RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 SLC7A4O43246 635 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 SCELO95171 688 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 FABP3P05413 133 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 YES1P07947 543 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 OR4Q2P0C623 313 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 C7P10643 843 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 PRKACBP22694 351 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 CASP3P42574 277 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 HUNKP57058 714 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 TBX4P57082 545 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 RPP38P78345 283 aaKnown RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 SCN1BQ07699 218 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 CTU2Q2VPK5 515 aaKnown RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 PYCR3Q53H96 274 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 RNASE12Q5GAN4 147 aaKnown RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 VTCN1Q7Z7D3 282 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 TIGD4Q8IY51 512 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 VPS37AQ8NEZ2 397 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 GRPEL2Q8TAA5 225 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 LRRC20Q8TCA0 184 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 MYLPFQ96A32 169 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 SEPT5Q99719 369 aaPredicted RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 OR2B2Q9GZK3 357 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 THG1LQ9NWX6 298 aaKnown RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 LRP5O75197 1615 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 FAM172BPA6NC97 362 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 FABP12A6NFH5 140 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 PLSCR1O15162 318 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 PGRP06401 933 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 AXLP30530 894 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 BRCC3P46736 316 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 LHX1P48742 406 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 CDH12P55289 794 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 ADARB1P78563 741 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms