RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 NFE2L1Q14494 772 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 TNFAIP8L3Q5GJ75 292 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 AARS2Q5JTZ9 985 aaKnown RBP13.13□□□□□ -0.31
CLK3-218ENST00000566926 TMEM164Q5U3C3 297 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 KLHL35Q6PF15 583 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 GALNT7Q86SF2 657 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 CLEC14AQ86T13 490 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 KCNMB4Q86W47 210 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 ZNF761Q86XN6 746 aaPredicted RBP13.13□□□□□ -0.31
CLK3-218ENST00000566926 ARFGAP2Q8N6H7 521 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 OR6P1Q8NGX9 317 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 OR4L1Q8NH43 312 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 ZFPM2Q8WW38 1151 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 HDAC10Q969S8 669 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 PRR11Q96HE9 360 aaPredicted RBP13.13□□□□□ -0.31
CLK3-218ENST00000566926 SGSM3Q96HU1 749 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 DCBLD2Q96PD2 775 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 B3GNT4Q9C0J1 378 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 SLC40A1Q9NP59 571 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 C20orf96Q9NUD7 363 aaPredicted RBP13.13□□□□□ -0.31
CLK3-218ENST00000566926 EURLQ9NYK6 297 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 PCDHGA7Q9Y5G6 932 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 HEBP2Q9Y5Z4 205 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 BPTFQ12830 3046 aa13.13□□□□□ -0.31
CLK3-218ENST00000566926 A0A1W2PNU3 283 aaPredicted RBP13.12□□□□□ -0.31
CLK3-218ENST00000566926 CCDC78A2IDD5 438 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 CCDC162PA2VCL2 907 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 OR52A4PA6NMU1 304 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 CDRT15L2A8MXV6 281 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 UBXN7O94888 489 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 FTH1P02794 183 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 SLC35G4P0C7Q5 338 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 THRAP10827 490 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 HOXB3P14651 431 aaPredicted RBP13.12□□□□□ -0.31
CLK3-218ENST00000566926 NDUFS1P28331 727 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 NMBRP28336 390 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 FOXN2P32314 431 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 GP5P40197 560 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 ABCG1P45844 678 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 MAPK9P45984 424 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 SLCO1A2P46721 670 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 CDKN1CP49918 316 aaPredicted RBP13.12□□□□□ -0.31
CLK3-218ENST00000566926 ARSDP51689 593 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 CSE1LP55060 971 aaKnown RBP13.12□□□□□ -0.31
CLK3-218ENST00000566926 CLCA4Q14CN2 919 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 DBN1Q16643 649 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 FASTKD1Q53R41 847 aaKnown RBP13.12□□□□□ -0.31
CLK3-218ENST00000566926 UBAP2Q5T6F2 1119 aaKnown RBP13.12□□□□□ -0.31
CLK3-218ENST00000566926 TRMT10BQ6PF06 316 aaKnown RBP13.12□□□□□ -0.31
CLK3-218ENST00000566926 PACS1Q6VY07 963 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 ZNF574Q6ZN55 896 aaPredicted RBP13.12□□□□□ -0.31
CLK3-218ENST00000566926 TMPRSS9Q7Z410 1059 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 CFAP206Q8IYR0 622 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 PPM1NQ8N819 430 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 AGBL5Q8NDL9 886 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 OR13J1Q8NGT2 312 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 TLCD1Q96CP7 247 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 CCDC74BQ96LY2 380 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 FCRL3Q96P31 734 aaPredicted RBP13.12□□□□□ -0.31
CLK3-218ENST00000566926 TBC1D10AQ9BXI6 508 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 DPH1Q9BZG8 443 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 PDP2Q9P2J9 529 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 PISDQ9UG56 409 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 VPS9D1Q9Y2B5 631 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 COLEC10Q9Y6Z7 277 aa13.12□□□□□ -0.31
CLK3-218ENST00000566926 WDFY3Q8IZQ1 3526 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 SMIM23A6NLE4 172 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 H3BQF6 201 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 IFRD1O00458 451 aaPredicted RBP13.11□□□□□ -0.31
CLK3-218ENST00000566926 PFDN6O15212 129 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 NVLO15381 856 aaKnown RBP13.11□□□□□ -0.31
CLK3-218ENST00000566926 SGTAO43765 313 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 FAM155BO75949 473 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 VAPBO95292 243 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 GOT2P00505 430 aaKnown RBP13.11□□□□□ -0.31
CLK3-218ENST00000566926 SNRPAP09012 282 aaKnown RBP13.11□□□□□ -0.31
CLK3-218ENST00000566926 OR56A5P0C7T3 313 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 MTHFD1P11586 935 aaKnown RBP13.11□□□□□ -0.31
CLK3-218ENST00000566926 OAS2P29728 719 aaKnown RBP13.11□□□□□ -0.31
CLK3-218ENST00000566926 CSF2RBP32927 897 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 ARCN1P48444 511 aaKnown RBP13.11□□□□□ -0.31
CLK3-218ENST00000566926 PLOD1Q02809 727 aaPredicted RBP13.11□□□□□ -0.31
CLK3-218ENST00000566926 CFHR1Q03591 330 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 RPA4Q13156 261 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 GPR18Q14330 331 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 KRT33BQ14525 404 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 C16orf72Q14CZ0 275 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 RPE65Q16518 533 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 GRTP1Q5TC63 336 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 BROXQ5VW32 411 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 MRNIPQ6NTE8 343 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 FAM83HQ6ZRV2 1179 aaPredicted RBP13.11□□□□□ -0.31
CLK3-218ENST00000566926 PIANPQ8IYJ0 282 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 DCAKDQ8WVC6 231 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 KCNE4Q8WWG9 221 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 ALKBH8Q96BT7 664 aaKnown RBP13.11□□□□□ -0.31
CLK3-218ENST00000566926 C12orf66Q96MD2 445 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 TSSK1BQ9BXA7 367 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 WWP1Q9H0M0 922 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 IMP3Q9NV31 184 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms