RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 MBL2P11226 248 aaPredicted RBP16.44■□□□□ 0.22
CMTM3-213ENST00000566756 IL1RNP18510 177 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 CTNNB1P35222 781 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 TBC1D25Q3MII6 688 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 LYPLAL1Q5VWZ2 237 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 RNF219Q5W0B1 726 aaPredicted RBP16.44■□□□□ 0.22
CMTM3-213ENST00000566756 KLHL35Q6PF15 583 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 MILR1Q7Z6M3 343 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 TMC8Q8IU68 726 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 OR13F1Q8NGS4 319 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 SPPL3Q8TCT6 385 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 TMBIM1Q969X1 311 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 MAGED4Q96JG8 741 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 PPM1MQ96MI6 270 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 CDK15Q96Q40 435 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 FAM126AQ9BYI3 521 aaPredicted RBP16.44■□□□□ 0.22
CMTM3-213ENST00000566756 IPPKQ9H8X2 491 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 BPIFA1Q9NP55 256 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 GNPTGQ9UJJ9 305 aa16.44■□□□□ 0.22
CMTM3-213ENST00000566756 NOL3O60936 208 aaKnown RBP16.43■□□□□ 0.22
CMTM3-213ENST00000566756 SCELO95171 688 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 ATE1O95260 518 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 IL6P05231 212 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 DGKAP23743 735 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 GABRR2P28476 465 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 SELPLGQ14242 412 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 BROXQ5VW32 411 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 TTC23LQ6PF05 361 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 GAREM2Q75VX8 874 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 TRIM46Q7Z4K8 759 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 THAP5Q7Z6K1 395 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 RALGPS2Q86X27 583 aaPredicted RBP16.43■□□□□ 0.22
CMTM3-213ENST00000566756 ZDHHC13Q8IUH4 622 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 RBFAQ8N0V3 343 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 ELMOD1Q8N336 334 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 PJA1Q8NG27 643 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 OR2T12Q8NG77 320 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 MRPS31Q92665 395 aaKnown RBP16.43■□□□□ 0.22
CMTM3-213ENST00000566756 HDAC2Q92769 488 aaKnown RBP16.43■□□□□ 0.22
CMTM3-213ENST00000566756 SDCCAG3Q96C92 435 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 NRBF2Q96F24 287 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 SMIM14Q96QK8 99 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 FEM1AQ9BSK4 669 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 CLPBQ9H078 707 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 SARS2Q9NP81 518 aaKnown RBP16.43■□□□□ 0.22
CMTM3-213ENST00000566756 HPS4Q9NQG7 708 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 TRPS1Q9UHF7 1281 aa16.43■□□□□ 0.22
CMTM3-213ENST00000566756 POLR3HQ9Y535 204 aaPredicted RBP16.43■□□□□ 0.22
CMTM3-213ENST00000566756 SEC14L2O76054 403 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 GALK1P51570 392 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 MTPNP58546 118 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 GABARAPL2P60520 117 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 AP1S1P61966 158 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 SMAD3P84022 425 aaKnown RBP16.42■□□□□ 0.22
CMTM3-213ENST00000566756 ABRAXAS2Q15018 415 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 ZNF829Q3KNS6 432 aaPredicted RBP16.42■□□□□ 0.22
CMTM3-213ENST00000566756 RFTN2Q52LD8 501 aaPredicted RBP16.42■□□□□ 0.22
CMTM3-213ENST00000566756 GPR107Q5VW38 600 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 PTRHD1Q6GMV3 140 aaKnown RBP16.42■□□□□ 0.22
CMTM3-213ENST00000566756 SULT1C3Q6IMI6 304 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 ZNF548Q8NEK5 533 aaPredicted RBP16.42■□□□□ 0.22
CMTM3-213ENST00000566756 GTF2H4Q92759 462 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 THAP11Q96EK4 314 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 RPL10LQ96L21 214 aaKnown RBP16.42■□□□□ 0.22
CMTM3-213ENST00000566756 MUS81Q96NY9 551 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 NTMT1Q9BV86 223 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 GPR63Q9BZJ6 419 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 MAGIXQ9H6Y5 334 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 RDH14Q9HBH5 336 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 HELZP42694 1942 aaKnown RBP16.42■□□□□ 0.22
CMTM3-213ENST00000566756 LINC01553A4QN01 128 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 C16orf96A6NNT2 1141 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 GREM1O60565 184 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 ABCB7O75027 752 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 RB1P06400 928 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 MTHFRP42898 656 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 SGSHP51688 502 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 SLC7A9P82251 487 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 TMEM214Q6NUQ4 689 aaKnown RBP16.42■□□□□ 0.22
CMTM3-213ENST00000566756 Q6ZNB5 142 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 EGFL6Q8IUX8 553 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 FAM217AQ8IXS0 508 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 ARL14EPQ8N8R7 260 aaPredicted RBP16.42■□□□□ 0.22
CMTM3-213ENST00000566756 ADAMTS19Q8TE59 1207 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 POF1BQ8WVV4 589 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 BORCS5Q969J3 196 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 WBP2Q969T9 261 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 SLC22A12Q96S37 553 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 PALMDQ9NP74 551 aa16.42■□□□□ 0.22
CMTM3-213ENST00000566756 TRBV5-4A0A0C4DH59 114 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 G3V2T6 193 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 GFRA2O00451 464 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 TAPBPO15533 448 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 DNAJB5O75953 348 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 RETP07949 1114 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 EBLN1P0CF75 366 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 IRF1P10914 325 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 ARL1P40616 181 aaPredicted RBP16.41■□□□□ 0.22
CMTM3-213ENST00000566756 STT3AP46977 705 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 PIK3CGP48736 1102 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms