RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 RFPL1O75677 317 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 SLC35G4P0C7Q5 338 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 ARCN1P48444 511 aaKnown RBP18.4■□□□□ 0.54
SPSB3-207ENST00000565550 PMS2P54278 862 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 TUBB4BP68371 445 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 SRSF1Q07955 248 aaKnown RBP eCLIP18.4■□□□□ 0.54
SPSB3-207ENST00000565550 TUBB2AQ13885 445 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 UBAP2LQ14157 1087 aaKnown RBP18.4■□□□□ 0.54
SPSB3-207ENST00000565550 PPP1R7Q15435 360 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 GPR19Q15760 415 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 ZRANB3Q5FWF4 1079 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 TSTD2Q5T7W7 516 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 CAPRIN2Q6IMN6 1127 aaKnown RBP18.4■□□□□ 0.54
SPSB3-207ENST00000565550 FBXO38Q6PIJ6 1188 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 ASB18Q6ZVZ8 466 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 MPP5Q8N3R9 675 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 LILRA3Q8N6C8 439 aaPredicted RBP18.4■□□□□ 0.54
SPSB3-207ENST00000565550 TEX19Q8NA77 164 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 STYXQ8WUJ0 223 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 DCUN1D1Q96GG9 259 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 PPM1MQ96MI6 270 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 TUBB2BQ9BVA1 445 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 CHRAC1Q9NRG0 131 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 CRLS1Q9UJA2 301 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 PLAAQ9Y263 795 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 TCAF1Q9Y4C2 921 aa18.4■□□□□ 0.54
SPSB3-207ENST00000565550 CCDC162PA2VCL2 907 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 AGAP14A8MT82 685 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 SCRG1O75711 98 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 ZBTB11O95625 1053 aaPredicted RBP18.39■□□□□ 0.53
SPSB3-207ENST00000565550 PTPN4P29074 926 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 KPNA2P52292 529 aaKnown RBP18.39■□□□□ 0.53
SPSB3-207ENST00000565550 RPS18P62269 152 aaKnown RBP18.39■□□□□ 0.53
SPSB3-207ENST00000565550 PDE1BQ01064 536 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 C2orf54Q08AI8 447 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 PTK6Q13882 451 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 KRT33BQ14525 404 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 CES3Q6UWW8 571 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 CAND1Q86VP6 1230 aaKnown RBP18.39■□□□□ 0.53
SPSB3-207ENST00000565550 PIANPQ8IYJ0 282 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 OR4E2Q8NGC2 313 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 GRK7Q8WTQ7 553 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 ZNF501Q96CX3 271 aaPredicted RBP18.39■□□□□ 0.53
SPSB3-207ENST00000565550 RMDN2Q96LZ7 410 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 RANBP9Q96S59 729 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 GPR87Q9BY21 358 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 PCYOX1Q9UHG3 505 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 COLEC10Q9Y6Z7 277 aa18.39■□□□□ 0.53
SPSB3-207ENST00000565550 NBASA2RRP1 2371 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 HEATR9A2RTY3 570 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 TTI1O43156 1089 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 CPNE3O75131 537 aaKnown RBP18.38■□□□□ 0.53
SPSB3-207ENST00000565550 DNAJB5O75953 348 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 GAS8O95995 478 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 RALBP11234 206 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 POLR2CP19387 275 aaPredicted RBP18.38■□□□□ 0.53
SPSB3-207ENST00000565550 ADRA1DP25100 572 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 NMBRP28336 390 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 HADHAP40939 763 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 PAFAH1B1P43034 410 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 MAGEA6P43360 314 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 RPS15P62841 145 aaKnown RBP18.38■□□□□ 0.53
SPSB3-207ENST00000565550 UGT8Q16880 541 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 TMTC4Q5T4D3 741 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 LRRC8BQ6P9F7 803 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 SNX20Q7Z614 316 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 TMEM126BQ8IUX1 230 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 APLFQ8IW19 511 aaPredicted RBP18.38■□□□□ 0.53
SPSB3-207ENST00000565550 AGGF1Q8N302 714 aaeCLIP18.38■□□□□ 0.53
SPSB3-207ENST00000565550 SLC38A9Q8NBW4 561 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 PPHLN1Q8NEY8 458 aaKnown RBP18.38■□□□□ 0.53
SPSB3-207ENST00000565550 MR1Q95460 341 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 HDAC10Q969S8 669 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 ULK4Q96C45 1275 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 KRT12Q99456 494 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 CCM2Q9BSQ5 444 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 TRIM55Q9BYV6 548 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 SOHLH2Q9NX45 425 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 ANKMY1Q9P2S6 941 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 ASIC3Q9UHC3 531 aa18.38■□□□□ 0.53
SPSB3-207ENST00000565550 FARSAQ9Y285 508 aaKnown RBP18.38■□□□□ 0.53
SPSB3-207ENST00000565550 SLC9B1P1A6NJY1 282 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 H7C0S8 307 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 GOT2P00505 430 aaKnown RBP18.37■□□□□ 0.53
SPSB3-207ENST00000565550 PDGFAP04085 211 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 ITGALP20701 1170 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 PSMA3P25788 255 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 NDUFS1P28331 727 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 FOXN2P32314 431 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 PRLHRP49683 370 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 MLLT10P55197 1068 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 PRKAA1Q13131 559 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 GPS2Q13227 327 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 SEMA3AQ14563 771 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 RNASEH2BQ5TBB1 312 aaKnown RBP18.37■□□□□ 0.53
SPSB3-207ENST00000565550 PRAMEF17Q5VTA0 474 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 TAS2R42Q7RTR8 314 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 SERPINA9Q86WD7 417 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 NXPE1Q8N323 547 aa18.37■□□□□ 0.53
SPSB3-207ENST00000565550 NAT8LQ8N9F0 302 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms