RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 WISP1O95388 367 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 CCDC175P0C221 793 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 ADRA1DP25100 572 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 PRDX3P30048 256 aaKnown RBP17.15■□□□□ 0.34
NME3-205ENST00000563854 SESN2P58004 480 aaPredicted RBP17.15■□□□□ 0.34
NME3-205ENST00000563854 BASP1P80723 227 aaKnown RBP17.15■□□□□ 0.34
NME3-205ENST00000563854 CRTC2Q53ET0 693 aaPredicted RBP17.15■□□□□ 0.34
NME3-205ENST00000563854 LYPLAL1Q5VWZ2 237 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 GSTA5Q7RTV2 222 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 CLIP3Q96DZ5 547 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 ABHD17AQ96GS6 310 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 TFB2MQ9H5Q4 396 aaKnown RBP17.15■□□□□ 0.34
NME3-205ENST00000563854 CASS4Q9NQ75 786 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 ACTR10Q9NZ32 417 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 PLAGL1Q9UM63 463 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 ICKQ9UPZ9 632 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 MAN2B2Q9Y2E5 1009 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 TCAF1Q9Y4C2 921 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 KCNMB2Q9Y691 235 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 ATXN8OSP0DMR3 200 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 CYP2A7P20853 494 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 RPL22P35268 128 aaKnown RBP17.14■□□□□ 0.33
NME3-205ENST00000563854 TERF1P54274 439 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 RPS15P62841 145 aaKnown RBP17.14■□□□□ 0.33
NME3-205ENST00000563854 KCNC4Q03721 635 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 ABRQ12979 859 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 GPS2Q13227 327 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 KCTD19Q17RG1 926 aaPredicted RBP17.14■□□□□ 0.33
NME3-205ENST00000563854 FASTKD1Q53R41 847 aaKnown RBP17.14■□□□□ 0.33
NME3-205ENST00000563854 COLEC12Q5KU26 742 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 LDB1Q86U70 411 aaPredicted RBP17.14■□□□□ 0.33
NME3-205ENST00000563854 TRIM73Q86UV7 250 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 OR4L1Q8NH43 312 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 OR8K5Q8NH50 307 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 RANBP9Q96S59 729 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 SLC7A5P2Q9GIP4 190 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 CLMPQ9H6B4 373 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 PCDHGA6Q9Y5G7 932 aa17.14■□□□□ 0.33
NME3-205ENST00000563854 FGGP02679 453 aa17.13■□□□□ 0.33
NME3-205ENST00000563854 NR1D1P20393 614 aa17.13■□□□□ 0.33
NME3-205ENST00000563854 PSMA3P25788 255 aa17.13■□□□□ 0.33
NME3-205ENST00000563854 SHMT2P34897 504 aa17.13■□□□□ 0.33
NME3-205ENST00000563854 CRADDP78560 199 aa17.13■□□□□ 0.33
NME3-205ENST00000563854 SEMA3AQ14563 771 aa17.13■□□□□ 0.33
NME3-205ENST00000563854 SIX1Q15475 284 aaPredicted RBP17.13■□□□□ 0.33
NME3-205ENST00000563854 LACTB2Q53H82 288 aaPredicted RBP17.13■□□□□ 0.33
NME3-205ENST00000563854 ADGRF3Q8IZF5 1079 aa17.13■□□□□ 0.33
NME3-205ENST00000563854 OTUD6BQ8N6M0 293 aa17.13■□□□□ 0.33
NME3-205ENST00000563854 OR1L3Q8NH93 324 aa17.13■□□□□ 0.33
NME3-205ENST00000563854 CPT1BQ92523 772 aa17.13■□□□□ 0.33
NME3-205ENST00000563854 N4BP2L2Q92802 583 aaPredicted RBP17.13■□□□□ 0.33
NME3-205ENST00000563854 ANAPC5Q9UJX4 755 aa17.13■□□□□ 0.33
NME3-205ENST00000563854 TP53TG5Q9Y2B4 290 aa17.13■□□□□ 0.33
NME3-205ENST00000563854 TLN1Q9Y490 2541 aaKnown RBP17.13■□□□□ 0.33
NME3-205ENST00000563854 ASH1LQ9NR48 2969 aaKnown RBP17.13■□□□□ 0.33
NME3-205ENST00000563854 SLC5A10A0PJK1 596 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 F8W8V4 182 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 MKRN2OSH3BPM6 223 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 CEP104O60308 925 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 KLK3P07288 261 aaPredicted RBP17.12■□□□□ 0.33
NME3-205ENST00000563854 PTPN4P29074 926 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 CXCR5P32302 372 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 TLE1Q04724 770 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 CCNG2Q16589 344 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 DEFB110Q30KQ9 67 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 SPESP1Q6UW49 350 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 UNC5AQ6ZN44 842 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 ZNF534Q76KX8 674 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 NLRP9Q7RTR0 991 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 TBC1D21Q8IYX1 336 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 SLC38A9Q8NBW4 561 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 LKAAEAR1Q8TD35 194 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 UBE2Q2Q8WVN8 375 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 TRAPPC9Q96Q05 1148 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 TSSK1BQ9BXA7 367 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 PITPNM3Q9BZ71 974 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 CHST8Q9H2A9 424 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 ACTR5Q9H9F9 607 aaPredicted RBP17.12■□□□□ 0.33
NME3-205ENST00000563854 CHRAC1Q9NRG0 131 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 LATS2Q9NRM7 1088 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 CATSPERZQ9NTU4 200 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 CIDEBQ9UHD4 219 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 PIKFYVEQ9Y2I7 2098 aa17.12■□□□□ 0.33
NME3-205ENST00000563854 SPTA1P02549 2419 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 IQCF5A8MTL0 148 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 BHMG1C9JSJ3 638 aaPredicted RBP17.11■□□□□ 0.33
NME3-205ENST00000563854 RFPL1O75677 317 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 UGT2B7P16662 529 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 ACADLP28330 430 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 PPARGP37231 505 aaPredicted RBP17.11■□□□□ 0.33
NME3-205ENST00000563854 KCNJ1P48048 391 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 ACVR1Q04771 509 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 HSPA14Q0VDF9 509 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 PTCHD3Q3KNS1 767 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 AARS2Q5JTZ9 985 aaKnown RBP17.11■□□□□ 0.33
NME3-205ENST00000563854 PCID2Q5JVF3 399 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 LCN10Q6JVE6 187 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 CDHR3Q6ZTQ4 885 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 KRT222Q8N1A0 295 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 C19orf47Q8N9M1 422 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms