RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 PCDHB11Q9Y5F2 797 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 CCDC188H7C350 402 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 BANF1O75531 89 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 SLCO2B1O94956 709 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 APOA4P06727 396 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 F7P08709 466 aaPredicted RBP27.47■■□□□ 1.99
NME3-203ENST00000563367 FMO4P31512 558 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 VAC14Q08AM6 782 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 MSS51Q4VC12 460 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 ZNF789Q5FWF6 425 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 SYDE1Q6ZW31 735 aaPredicted RBP27.47■■□□□ 1.99
NME3-203ENST00000563367 GPR155Q7Z3F1 870 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 PCGF5Q86SE9 256 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 HOOK3Q86VS8 718 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 AMIGO1Q86WK6 493 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 TBC1D21Q8IYX1 336 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 OR5K2Q8NHB8 316 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 RNF31Q96EP0 1072 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 STAMBPL1Q96FJ0 436 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 ZPBPQ9BS86 351 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 TRIM51Q9BSJ1 452 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 TRIT1Q9H3H1 467 aaKnown RBP27.47■■□□□ 1.99
NME3-203ENST00000563367 RNF14Q9UBS8 474 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 PILRAQ9UKJ1 303 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 POMT2Q9UKY4 750 aa27.47■■□□□ 1.99
NME3-203ENST00000563367 SPTBP11277 2137 aa27.46■■□□□ 1.99
NME3-203ENST00000563367 TTI1O43156 1089 aa27.46■■□□□ 1.99
NME3-203ENST00000563367 USP1O94782 785 aa27.46■■□□□ 1.99
NME3-203ENST00000563367 FOLR1P15328 257 aa27.46■■□□□ 1.99
NME3-203ENST00000563367 PRKAA1Q13131 559 aa27.46■■□□□ 1.99
NME3-203ENST00000563367 RNF187Q5TA31 235 aaPredicted RBP27.46■■□□□ 1.99
NME3-203ENST00000563367 CCDC81Q6ZN84 652 aa27.46■■□□□ 1.99
NME3-203ENST00000563367 ADGRF3Q8IZF5 1079 aa27.46■■□□□ 1.99
NME3-203ENST00000563367 RUNDC3BQ96NL0 473 aa27.46■■□□□ 1.99
NME3-203ENST00000563367 PANX3Q96QZ0 392 aa27.46■■□□□ 1.99
NME3-203ENST00000563367 GSAPA4D1B5 854 aa27.45■■□□□ 1.98
NME3-203ENST00000563367 K7ENP7 123 aa27.45■■□□□ 1.98
NME3-203ENST00000563367 S1PR4O95977 384 aa27.45■■□□□ 1.98
NME3-203ENST00000563367 DHX9Q08211 1270 aaKnown RBP27.45■■□□□ 1.98
NME3-203ENST00000563367 ABRQ12979 859 aa27.45■■□□□ 1.98
NME3-203ENST00000563367 DNAJC21Q5F1R6 531 aaKnown RBP27.45■■□□□ 1.98
NME3-203ENST00000563367 MANEAQ5SRI9 462 aa27.45■■□□□ 1.98
NME3-203ENST00000563367 ZNF470Q6ECI4 717 aa27.45■■□□□ 1.98
NME3-203ENST00000563367 INO80CQ6PI98 192 aaPredicted RBP27.45■■□□□ 1.98
NME3-203ENST00000563367 TIPARPQ7Z3E1 657 aaKnown RBP27.45■■□□□ 1.98
NME3-203ENST00000563367 UNC5BQ8IZJ1 945 aa27.45■■□□□ 1.98
NME3-203ENST00000563367 SIDT2Q8NBJ9 832 aaKnown RBP27.45■■□□□ 1.98
NME3-203ENST00000563367 SNRNP27Q8WVK2 155 aaKnown RBP27.45■■□□□ 1.98
NME3-203ENST00000563367 ELMO2Q96JJ3 720 aa27.45■■□□□ 1.98
NME3-203ENST00000563367 POLG2Q9UHN1 485 aa27.45■■□□□ 1.98
NME3-203ENST00000563367 PLAGL1Q9UM63 463 aa27.45■■□□□ 1.98
NME3-203ENST00000563367 TDRKHQ9Y2W6 561 aaKnown RBP27.45■■□□□ 1.98
NME3-203ENST00000563367 TMEM184BQ9Y519 407 aaPredicted RBP27.45■■□□□ 1.98
NME3-203ENST00000563367 NIPSNAP2O75323 286 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 STK17BO94768 372 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 EBLN1P0CF75 366 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 ZNF28P17035 718 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 WT1P19544 449 aaPredicted RBP27.44■■□□□ 1.98
NME3-203ENST00000563367 PRDX3P30048 256 aaKnown RBP27.44■■□□□ 1.98
NME3-203ENST00000563367 ADARP55265 1226 aaKnown RBP27.44■■□□□ 1.98
NME3-203ENST00000563367 ETF1P62495 437 aaKnown RBP27.44■■□□□ 1.98
NME3-203ENST00000563367 CTBP1Q13363 440 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 THOC5Q13769 683 aaKnown RBP27.44■■□□□ 1.98
NME3-203ENST00000563367 IL11RAQ14626 422 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 TMED2Q15363 201 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 LONRF1Q17RB8 773 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 UNC5AQ6ZN44 842 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 KMT5CQ86Y97 462 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 DENND6AQ8IWF6 608 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 D2HGDHQ8N465 521 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 CFAP61Q8NHU2 1237 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 PWWP2AQ96N64 755 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 KRT12Q99456 494 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 C20orf96Q9NUD7 363 aaPredicted RBP27.44■■□□□ 1.98
NME3-203ENST00000563367 FAM169AQ9Y6X4 670 aa27.44■■□□□ 1.98
NME3-203ENST00000563367 PFDN6O15212 129 aa27.43■■□□□ 1.98
NME3-203ENST00000563367 RAD1O60671 282 aa27.43■■□□□ 1.98
NME3-203ENST00000563367 ESR1P03372 595 aa27.43■■□□□ 1.98
NME3-203ENST00000563367 FGF5P12034 268 aa27.43■■□□□ 1.98
NME3-203ENST00000563367 CASQ1P31415 396 aa27.43■■□□□ 1.98
NME3-203ENST00000563367 HSD11B2P80365 405 aa27.43■■□□□ 1.98
NME3-203ENST00000563367 SYT10Q6XYQ8 523 aa27.43■■□□□ 1.98
NME3-203ENST00000563367 IGDCC3Q8IVU1 814 aa27.43■■□□□ 1.98
NME3-203ENST00000563367 CACNA2D3Q8IZS8 1091 aa27.43■■□□□ 1.98
NME3-203ENST00000563367 FAM136AQ96C01 138 aa27.43■■□□□ 1.98
NME3-203ENST00000563367 INTS10Q9NVR2 710 aaKnown RBP27.43■■□□□ 1.98
NME3-203ENST00000563367 ACTR10Q9NZ32 417 aa27.43■■□□□ 1.98
NME3-203ENST00000563367 GALPQ9UBC7 116 aa27.43■■□□□ 1.98
NME3-203ENST00000563367 TEX51A0A1B0GUA7 166 aa27.42■■□□□ 1.98
NME3-203ENST00000563367 SLC9B1P1A6NJY1 282 aa27.42■■□□□ 1.98
NME3-203ENST00000563367 MATN2O00339 956 aa27.42■■□□□ 1.98
NME3-203ENST00000563367 ZBTB11O95625 1053 aaPredicted RBP27.42■■□□□ 1.98
NME3-203ENST00000563367 DLGAP3O95886 979 aa27.42■■□□□ 1.98
NME3-203ENST00000563367 PGAM1P18669 254 aa27.42■■□□□ 1.98
NME3-203ENST00000563367 CDH3P22223 829 aa27.42■■□□□ 1.98
NME3-203ENST00000563367 SHMT2P34897 504 aa27.42■■□□□ 1.98
NME3-203ENST00000563367 ARL4DP49703 201 aa27.42■■□□□ 1.98
NME3-203ENST00000563367 ATP1A2P50993 1020 aa27.42■■□□□ 1.98
NME3-203ENST00000563367 MORF4L2Q15014 288 aa27.42■■□□□ 1.98
NME3-203ENST00000563367 HIBCHQ6NVY1 386 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms