RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TWIST2Q8WVJ9 160 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 TUBB6Q9BUF5 446 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 IPPKQ9H8X2 491 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 PRDM6Q9NQX0 595 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 SLC23A2Q9UGH3 650 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 EBF1Q9UH73 591 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 G3BP2Q9UN86 482 aaKnown RBP17.63■□□□□ 0.41
COMMD4-208ENST00000563220 MGAT4DA6NG13 374 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 H3BM21 787 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 K7EPI3 171 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 DCXO43602 365 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 STK16O75716 305 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 FUCA1P04066 466 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 AOC1P19801 751 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 LETMD1Q6P1Q0 360 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 KIF2BQ8N4N8 673 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 ACTRT2Q8TDY3 377 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 HMGB4Q8WW32 186 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 C19orf60Q96EN9 201 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 TM7SF3Q9NS93 570 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 C2orf42Q9NWW7 574 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 OPTCQ9UBM4 332 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 ST14Q9Y5Y6 855 aa17.63■□□□□ 0.41
COMMD4-208ENST00000563220 DOCK9Q9BZ29 2069 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 ATP6AP2A0A1C7CYW4 349 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 PIP5K1BO14986 540 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 MGRN1O60291 552 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 ATP6AP2O75787 350 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 PKNOX1P55347 436 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 AP1S2P56377 157 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 CCSMST1Q4G0I0 132 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 PRPF38BQ5VTL8 546 aaKnown RBP17.62■□□□□ 0.41
COMMD4-208ENST00000563220 GPR153Q6NV75 609 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 METTL2BQ6P1Q9 378 aaKnown RBP17.62■□□□□ 0.41
COMMD4-208ENST00000563220 PARP9Q8IXQ6 854 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 KLHL29Q96CT2 875 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 MYOCQ99972 504 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 LMAN1LQ9HAT1 526 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 BTRCQ9Y297 605 aa17.62■□□□□ 0.41
COMMD4-208ENST00000563220 CRCPO75575 148 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 UROSP10746 265 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 ESRRAP11474 423 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-208ENST00000563220 CD1EP15812 388 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 CALB2P22676 271 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 BDKRB1P46663 353 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 SFSWAPQ12872 951 aaKnown RBP17.61■□□□□ 0.41
COMMD4-208ENST00000563220 TRAF3Q13114 568 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 TBCCQ15814 346 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 PUS10Q3MIT2 529 aaKnown RBP17.61■□□□□ 0.41
COMMD4-208ENST00000563220 LARP4Q71RC2 724 aaKnown RBP eCLIP17.61■□□□□ 0.414e-6■■■■■ 28.7
COMMD4-208ENST00000563220 LRRTM4Q86VH4 590 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 CDYL2Q8N8U2 506 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 OR4F6Q8NGB9 312 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 HM13Q8TCT9 377 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 ATP6V1E2Q96A05 226 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 MARK4Q96L34 752 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 CATSPER2Q96P56 530 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 ZNF385DQ9H6B1 395 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 ITM2CQ9NQX7 267 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 ARHGEF3Q9NR81 526 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 PHPT1Q9NRX4 125 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-208ENST00000563220 LNPEPQ9UIQ6 1025 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 KRBA1A5PL33 1030 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 GIPC1O14908 333 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 KATNA1O75449 491 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 LINC00032P0C843 101 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 EPORP19235 508 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 CPA2P48052 419 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 SLC6A12P48065 614 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 HNMTP50135 292 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 KCNJ2P63252 427 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 KLF10Q13118 480 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 FZD5Q13467 585 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 GAS6Q14393 721 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 PTCHD3Q3KNS1 767 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 TCHHL1Q5QJ38 904 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-208ENST00000563220 MILR1Q7Z6M3 343 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 AMZ2Q86W34 360 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 TCAIMQ8N3R3 496 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 CPSF7Q8N684 471 aaKnown RBP17.61■□□□□ 0.41
COMMD4-208ENST00000563220 ASB12Q8WXK4 309 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 PYCR2Q96C36 320 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 APOOQ9BUR5 198 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 C1QTNF7Q9BXJ2 289 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 BTBD1Q9H0C5 482 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 ATG10Q9H0Y0 220 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 SLC32A1Q9H598 525 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 CIDEBQ9UHD4 219 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 TAGLN3Q9UI15 199 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 ANGPTL3Q9Y5C1 460 aa17.61■□□□□ 0.41
COMMD4-208ENST00000563220 C1orf105O95561 183 aa17.6■□□□□ 0.41
COMMD4-208ENST00000563220 OTCP00480 354 aa17.6■□□□□ 0.41
COMMD4-208ENST00000563220 CATP04040 527 aaKnown RBP17.6■□□□□ 0.41
COMMD4-208ENST00000563220 MYCLP1P12525 358 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-208ENST00000563220 MAP4P27816 1152 aaKnown RBP17.6■□□□□ 0.41
COMMD4-208ENST00000563220 ACADLP28330 430 aa17.6■□□□□ 0.41
COMMD4-208ENST00000563220 CCNG1P51959 295 aa17.6■□□□□ 0.41
COMMD4-208ENST00000563220 PLOD1Q02809 727 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-208ENST00000563220 PRKCQQ04759 706 aa17.6■□□□□ 0.41
COMMD4-208ENST00000563220 SNCBQ16143 134 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms