RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 USP7Q93009 1102 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 MVB12BQ9H7P6 319 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 INTS10Q9NVR2 710 aaKnown RBP16.13■□□□□ 0.17
CDT1-202ENST00000562747 SLC24A2Q9UI40 661 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 FAM169AQ9Y6X4 670 aa16.13■□□□□ 0.17
CDT1-202ENST00000562747 UBA6A0AVT1 1052 aaPredicted RBP16.12■□□□□ 0.17
CDT1-202ENST00000562747 TOX3O15405 576 aaPredicted RBP16.12■□□□□ 0.17
CDT1-202ENST00000562747 CAPN5O15484 640 aaPredicted RBP16.12■□□□□ 0.17
CDT1-202ENST00000562747 TUBB4AP04350 444 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 ANKRD34CP0C6C1 535 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 CCR7P32248 378 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 ITGA8P53708 1063 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 MAPK10P53779 464 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 TBR1Q16650 682 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 MANEAQ5SRI9 462 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 DTX1Q86Y01 620 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.12■□□□□ 0.175e-7■■■■□ 26.7
CDT1-202ENST00000562747 BBOF1Q8ND07 529 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 ACVR1CQ8NER5 493 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 CALML6Q8TD86 181 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 ASZ1Q8WWH4 475 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 LPGAT1Q92604 370 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 TFGQ92734 400 aaPredicted RBP16.12■□□□□ 0.17
CDT1-202ENST00000562747 PMEPA1Q969W9 287 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 LRRC39Q96DD0 335 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 TRIM44Q96DX7 344 aaPredicted RBP16.12■□□□□ 0.17
CDT1-202ENST00000562747 ZDHHC12Q96GR4 267 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 C9orf72Q96LT7 481 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 FERD3LQ96RJ6 166 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 EBNA1BP2Q99848 306 aaKnown RBP16.12■□□□□ 0.17
CDT1-202ENST00000562747 ARHGAP9Q9BRR9 750 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 B3GNT4Q9C0J1 378 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 CDC23Q9UJX2 597 aa16.12■□□□□ 0.17
CDT1-202ENST00000562747 IQCF5A8MTL0 148 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 A8MU76 341 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 H3BMM5 538 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 KPNA5O15131 536 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 GPC4O75487 556 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 ESR1P03372 595 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 APOA4P06727 396 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 ACADLP28330 430 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 GFERP55789 205 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 EIF3BP55884 814 aaKnown RBP16.11■□□□□ 0.17
CDT1-202ENST00000562747 ARL4CP56559 192 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 CKAP4Q07065 602 aaKnown RBP16.11■□□□□ 0.17
CDT1-202ENST00000562747 C2orf54Q08AI8 447 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 CRYMQ14894 314 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 BRD3Q15059 726 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 TMED2Q15363 201 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 BBS9Q3SYG4 887 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 MSS51Q4VC12 460 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 SPANXN3Q5MJ09 141 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 SNAP47Q5SQN1 464 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 ZNF470Q6ECI4 717 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 CENPUQ71F23 418 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 OOSP2Q86WS3 158 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 LKAAEAR1Q8TD35 194 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 BIRC8Q96P09 236 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 TGM7Q96PF1 710 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 ERP44Q9BS26 406 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 TRIM31Q9BZY9 425 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 C20orf96Q9NUD7 363 aaPredicted RBP16.11■□□□□ 0.17
CDT1-202ENST00000562747 IL1RAPL1Q9NZN1 696 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 KLHL3Q9UH77 587 aa16.11■□□□□ 0.17
CDT1-202ENST00000562747 OR5K3A6NET4 321 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 B4E171 279 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 BHMG1C9JSJ3 638 aaPredicted RBP16.1■□□□□ 0.17
CDT1-202ENST00000562747 KIF2AO00139 706 aaPredicted RBP16.1■□□□□ 0.17
CDT1-202ENST00000562747 TP73O15350 636 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 SUV39H1O43463 412 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 RAD51CO43502 376 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 SLCO2B1O94956 709 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 CCL4P13236 92 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 AOAHP28039 575 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 TSPAN7P41732 249 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 RPL21P46778 160 aaKnown RBP16.1■□□□□ 0.17
CDT1-202ENST00000562747 HSPA14Q0VDF9 509 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 HIF1AQ16665 826 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 CTSL3PQ5NE16 218 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 TMEM164Q5U3C3 297 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 NAPRTQ6XQN6 538 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 PRSS42Q7Z5A4 293 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 TBC1D21Q8IYX1 336 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 SLC22A15Q8IZD6 547 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 KRT222Q8N1A0 295 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 GABPB2Q8TAK5 448 aaPredicted RBP16.1■□□□□ 0.17
CDT1-202ENST00000562747 JPH3Q8WXH2 748 aaPredicted RBP16.1■□□□□ 0.17
CDT1-202ENST00000562747 FAM167BQ9BTA0 163 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 TFB2MQ9H5Q4 396 aaKnown RBP16.1■□□□□ 0.17
CDT1-202ENST00000562747 WHRNQ9P202 907 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 CDYLQ9Y232 598 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 ASF1AQ9Y294 204 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 SNX24Q9Y343 169 aa16.1■□□□□ 0.17
CDT1-202ENST00000562747 EFCAB7A8K855 629 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 BANF1O75531 89 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 URI1O94763 535 aaPredicted RBP16.09■□□□□ 0.17
CDT1-202ENST00000562747 S1PR4O95977 384 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 FGF3P11487 239 aaPredicted RBP16.09■□□□□ 0.17
CDT1-202ENST00000562747 PKMP14618 531 aaKnown RBP16.09■□□□□ 0.17
CDT1-202ENST00000562747 FMO4P31512 558 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms