RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 ZNF501Q96CX3 271 aaPredicted RBP16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 RUFY1Q96T51 708 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 TUBB2BQ9BVA1 445 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 FAM117AQ9C073 453 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 KLHL25Q9H0H3 589 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 TFB2MQ9H5Q4 396 aaKnown RBP16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 LHX9Q9NQ69 397 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 CHRAC1Q9NRG0 131 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 CATSPERZQ9NTU4 200 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 GEMIN8Q9NWZ8 242 aaKnown RBP16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 MARCH4Q9P2E8 410 aaPredicted RBP16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 ASF1AQ9Y294 204 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 DRG1Q9Y295 367 aaKnown RBP16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 SLC5A10A0PJK1 596 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 BHMG1C9JSJ3 638 aaPredicted RBP16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 NRDCO43847 1150 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 CPNE3O75131 537 aaKnown RBP16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 SCRG1O75711 98 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 ZIC2O95409 532 aaPredicted RBP16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 MT-ND3P03897 115 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 CCNYL3P0C7X3 344 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 ACADLP28330 430 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 PRDX3P30048 256 aaKnown RBP16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 VPS41P49754 854 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 MC1RQ01726 317 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 KCNAB2Q13303 367 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 ADGRF3Q8IZF5 1079 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 PRELID2Q8N945 189 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 PEX13Q92968 403 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 TTC1Q99614 292 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 PITPNM3Q9BZ71 974 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 ADNPQ9H2P0 1102 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 AKIRIN1Q9H9L7 192 aaPredicted RBP16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 C1GALT1Q9NS00 363 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 ACTR10Q9NZ32 417 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 PADI1Q9ULC6 663 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 TTC7AQ9ULT0 858 aaPredicted RBP16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 PLAGL1Q9UM63 463 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 TDRKHQ9Y2W6 561 aaKnown RBP16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 HEMK1Q9Y5R4 338 aaPredicted RBP16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 DOCK10Q96BY6 2186 aa16.68■□□□□ 0.26
CDC42BPB-208ENST00000561271 IQCF5A8MTL0 148 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 C2orf74A8MZ97 194 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 J3QKU1 62 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 FURINP09958 794 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 SFTPCP11686 197 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 MGAT1P26572 445 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 NMBRP28336 390 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 ABRQ12979 859 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 GPS2Q13227 327 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 ERV3-1Q14264 604 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 TRIP13Q15645 432 aaPredicted RBP16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 PCID2Q5JVF3 399 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 PRAMEF17Q5VTA0 474 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 FAM199XQ6PEV8 388 aaPredicted RBP16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 TRIM73Q86UV7 250 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 BPHLQ86WA6 291 aaPredicted RBP16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 FCRL4Q96PJ5 515 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 FANCEQ9HB96 536 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 TREX1Q9NSU2 369 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 SYBUQ9NX95 663 aa16.67■□□□□ 0.26
CDC42BPB-208ENST00000561271 TCRBV7S3A2A0A539 114 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 TMEM150CB9EJG8 249 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 SHMT2P34897 504 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 RPS18P62269 152 aaKnown RBP16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 CRTC2Q53ET0 693 aaPredicted RBP16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 AARS2Q5JTZ9 985 aaKnown RBP16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 SPESP1Q6UW49 350 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 C4orf22Q6V702 233 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 TMEM135Q86UB9 458 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 VRK3Q8IV63 474 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 KRT222Q8N1A0 295 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 OTUD6BQ8N6M0 293 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 OR5K2Q8NHB8 316 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 PCSK5Q92824 1860 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 SGSM3Q96HU1 749 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 TRAPPC9Q96Q05 1148 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 TRIM4Q9C037 500 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 IL22Q9GZX6 179 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 SLC25A18Q9H1K4 315 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 ACTL8Q9H568 366 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 KCND1Q9NSA2 647 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 ANAPC5Q9UJX4 755 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 KCND3Q9UK17 655 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 PCDHB3Q9Y5E6 796 aa16.66■□□□□ 0.26
CDC42BPB-208ENST00000561271 PIPSLA2A3N6 862 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 CDC14CA4D256 554 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 F8W8V4 182 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 CD3EAPO15446 510 aaKnown RBP16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 TPBGLP0DKB5 382 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 UGT2B7P16662 529 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 TPSB2P20231 275 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 CCR7P32248 378 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 HSPA14Q0VDF9 509 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 TPSAB1Q15661 275 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 ZNF789Q5FWF6 425 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 TTC27Q6P3X3 843 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 CES3Q6UWW8 571 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 UNC5AQ6ZN44 842 aa16.65■□□□□ 0.26
CDC42BPB-208ENST00000561271 TBC1D21Q8IYX1 336 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms