RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.49■□□□□ 0.07
LMX1B-204ENST00000561065 IFRD1O00458 451 aaPredicted RBP15.49■□□□□ 0.07
LMX1B-204ENST00000561065 KDM1AO60341 852 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 ZBTB11O95625 1053 aaPredicted RBP15.49■□□□□ 0.07
LMX1B-204ENST00000561065 GOT2P00505 430 aaKnown RBP15.49■□□□□ 0.07
LMX1B-204ENST00000561065 KRT14P02533 472 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 FTH1P02794 183 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 NTRK1P04629 796 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 OR56A5P0C7T3 313 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 ST6GAL1P15907 406 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 TCN2P20062 427 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 TPSB2P20231 275 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 COILP38432 576 aaPredicted RBP15.49■□□□□ 0.07
LMX1B-204ENST00000561065 CD151P48509 253 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 GNG11P61952 73 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 ACY1Q03154 408 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 ABRQ12979 859 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 RPA4Q13156 261 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 DNASE1L3Q13609 305 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 TPSAB1Q15661 275 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 DEFB109BQ30KR1 87 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 CRTC2Q53ET0 693 aaPredicted RBP15.49■□□□□ 0.07
LMX1B-204ENST00000561065 PRAMEF17Q5VTA0 474 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 CCDC137Q6PK04 289 aaKnown RBP15.49■□□□□ 0.07
LMX1B-204ENST00000561065 OR5AR1Q8NGP9 310 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 OR4L1Q8NH43 312 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 LCN9Q8WX39 176 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 HDAC10Q969S8 669 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 RUNDC3BQ96NL0 473 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 PITPNM3Q9BZ71 974 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 XKR8Q9H6D3 395 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 RNF14Q9UBS8 474 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 ICKQ9UPZ9 632 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 TCAF1Q9Y4C2 921 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 RELNP78509 3460 aa15.49■□□□□ 0.07
LMX1B-204ENST00000561065 GSAPA4D1B5 854 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 SLC9B1P1A6NJY1 282 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 TPBGLP0DKB5 382 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 PVRP15151 417 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 PAMP19021 973 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 ACADLP28330 430 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 PAFAH1B1P43034 410 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 CCR10P46092 362 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 FNTAP49354 379 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 SESN2P58004 480 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-204ENST00000561065 TUBB4BP68371 445 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 GPS1Q13098 491 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 GPS2Q13227 327 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 PRKG2Q13237 762 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 TUBB2AQ13885 445 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 BRD3Q15059 726 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 ZNF789Q5FWF6 425 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 ARMC6Q6NXE6 501 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 LRRC8BQ6P9F7 803 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 FAM199XQ6PEV8 388 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-204ENST00000561065 SDCCAG8Q86SQ7 713 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-204ENST00000561065 ADGRF3Q8IZF5 1079 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 CARFQ8N187 725 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 SLC38A9Q8NBW4 561 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 ELMO1Q92556 727 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 TFGQ92734 400 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-204ENST00000561065 TUBB2BQ9BVA1 445 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 AP1M1Q9BXS5 423 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 FAM117AQ9C073 453 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 SRMSQ9H3Y6 488 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 TFB2MQ9H5Q4 396 aaKnown RBP15.48■□□□□ 0.07
LMX1B-204ENST00000561065 MVB12BQ9H7P6 319 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 SOHLH2Q9NX45 425 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 SAMD15Q9P1V8 674 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 PCDHGA6Q9Y5G7 932 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 PCSK5Q92824 1860 aa15.48■□□□□ 0.07
LMX1B-204ENST00000561065 SETXQ7Z333 2677 aaKnown RBP15.48■□□□□ 0.07
LMX1B-204ENST00000561065 UBR5O95071 2799 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-204ENST00000561065 SLC5A10A0PJK1 596 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 CTAGE9A4FU28 777 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 BHMG1C9JSJ3 638 aaPredicted RBP15.47■□□□□ 0.07
LMX1B-204ENST00000561065 LIN7AO14910 233 aaPredicted RBP15.47■□□□□ 0.07
LMX1B-204ENST00000561065 MAP3K7O43318 606 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 SUV39H1O43463 412 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 PHF2O75151 1096 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 SFTPCP11686 197 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 MLNP12872 115 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 CDH3P22223 829 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 PRDX3P30048 256 aaKnown RBP15.47■□□□□ 0.07
LMX1B-204ENST00000561065 TTPAP49638 278 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 ARL4DP49703 201 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 RPS18P62269 152 aaKnown RBP15.47■□□□□ 0.07
LMX1B-204ENST00000561065 CRADDP78560 199 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 PPP1R7Q15435 360 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 CYP1B1Q16678 543 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 PCGF5Q86SE9 256 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 LDB1Q86U70 411 aaPredicted RBP15.47■□□□□ 0.07
LMX1B-204ENST00000561065 TRIM73Q86UV7 250 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 GABPB2Q8TAK5 448 aaPredicted RBP15.47■□□□□ 0.07
LMX1B-204ENST00000561065 FCRL4Q96PJ5 515 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 KLHL25Q9H0H3 589 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 KCNF1Q9H3M0 494 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 XAB2Q9HCS7 855 aaKnown RBP15.47■□□□□ 0.07
LMX1B-204ENST00000561065 C1GALT1Q9NS00 363 aa15.47■□□□□ 0.07
LMX1B-204ENST00000561065 MARCH4Q9P2E8 410 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms