RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 SPENQ96T58 3664 aaKnown RBP15.72■□□□□ 0.11
SNX1-213ENST00000561026 LRRK2Q5S007 2527 aa15.72■□□□□ 0.11
SNX1-213ENST00000561026 CCDC78A2IDD5 438 aa15.72■□□□□ 0.11
SNX1-213ENST00000561026 TMEM150CB9EJG8 249 aa15.72■□□□□ 0.11
SNX1-213ENST00000561026 LIN7AO14910 233 aaPredicted RBP15.72■□□□□ 0.11
SNX1-213ENST00000561026 PDGFAP04085 211 aa15.72■□□□□ 0.11
SNX1-213ENST00000561026 MSNP26038 577 aaKnown RBP15.72■□□□□ 0.11
SNX1-213ENST00000561026 STIP1P31948 543 aaKnown RBP15.72■□□□□ 0.11
SNX1-213ENST00000561026 ITIH4Q14624 930 aa15.72■□□□□ 0.11
SNX1-213ENST00000561026 PACS1Q6VY07 963 aa15.72■□□□□ 0.11
SNX1-213ENST00000561026 ATG4AQ8WYN0 398 aa15.72■□□□□ 0.11
SNX1-213ENST00000561026 CLIP3Q96DZ5 547 aa15.72■□□□□ 0.11
SNX1-213ENST00000561026 NLNQ9BYT8 704 aa15.72■□□□□ 0.11
SNX1-213ENST00000561026 ACTR10Q9NZ32 417 aa15.72■□□□□ 0.11
SNX1-213ENST00000561026 SEC16AO15027 2179 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 CCDC162PA2VCL2 907 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 ERI2A8K979 691 aaKnown RBP15.71■□□□□ 0.11
SNX1-213ENST00000561026 CYSRT1A8MQ03 144 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 QSOX1O00391 747 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 FTH1P02794 183 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 RAB40ALP0C0E4 278 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 PVRP15151 417 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 CYP2A7P20853 494 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 ACADLP28330 430 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 FOXN2P32314 431 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 LMAN1P49257 510 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 CCDC38Q502W7 563 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 GAS2L3Q86XJ1 694 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 DNAAF3Q8N9W5 541 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 OR52K1Q8NGK4 314 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 OR5AR1Q8NGP9 310 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 KLHL25Q9H0H3 589 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 ING2Q9H160 280 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 ACTR5Q9H9F9 607 aaPredicted RBP15.71■□□□□ 0.11
SNX1-213ENST00000561026 PCMTD2Q9NV79 361 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 ICKQ9UPZ9 632 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 PLAAQ9Y263 795 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 ASF1AQ9Y294 204 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 CAPN6Q9Y6Q1 641 aa15.71■□□□□ 0.11
SNX1-213ENST00000561026 OR51F1A6NGY5 319 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 BHMG1C9JSJ3 638 aaPredicted RBP15.7■□□□□ 0.1
SNX1-213ENST00000561026 SHMT2P34897 504 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 CDH17Q12864 832 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 CPZQ66K79 652 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 SPESP1Q6UW49 350 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 UNC5AQ6ZN44 842 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 CDHR3Q6ZTQ4 885 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 TBC1D21Q8IYX1 336 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 RNF10Q8N5U6 811 aaKnown RBP15.7■□□□□ 0.1
SNX1-213ENST00000561026 ENDOVQ8N8Q3 282 aaKnown RBP15.7■□□□□ 0.1
SNX1-213ENST00000561026 OR13J1Q8NGT2 312 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 ADAMTS17Q8TE56 1095 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 ELMO1Q92556 727 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 MIB2Q96AX9 1013 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 ETNK1Q9HBU6 452 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 MLXIPLQ9NP71 852 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 ACSS2Q9NR19 701 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 IMPACTQ9P2X3 320 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 TCFL5Q9UL49 500 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 SNX7Q9UNH6 387 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 PIKFYVEQ9Y2I7 2098 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 NAV2Q8IVL1 2488 aa15.7■□□□□ 0.1
SNX1-213ENST00000561026 DOPEY2Q9Y3R5 2298 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 SLC5A10A0PJK1 596 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 HEATR9A2RTY3 570 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 ARGFXA6NJG6 315 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 LIASO43766 372 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 SUN1O94901 812 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 GAS8O95995 478 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 CAPN1P07384 714 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 CCL11P51671 97 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 ITGA1P56199 1179 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 PLOD1Q02809 727 aaPredicted RBP15.69■□□□□ 0.1
SNX1-213ENST00000561026 CHAF1BQ13112 559 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 UBAP2LQ14157 1087 aaKnown RBP15.69■□□□□ 0.1
SNX1-213ENST00000561026 BRD3Q15059 726 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 OASLQ15646 514 aaKnown RBP15.69■□□□□ 0.1
SNX1-213ENST00000561026 LYPLAL1Q5VWZ2 237 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 SYTL1Q8IYJ3 562 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 HDAC10Q969S8 669 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 COL26A1Q96A83 441 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 TCTN2Q96GX1 697 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 OR2A14Q96R47 310 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 DPH2Q9BQC3 489 aaPredicted RBP15.69■□□□□ 0.1
SNX1-213ENST00000561026 SLC25A23Q9BV35 468 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 FRMD8P1Q9BZ68 369 aaPredicted RBP15.69■□□□□ 0.1
SNX1-213ENST00000561026 SLC2A6Q9UGQ3 507 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 POLG2Q9UHN1 485 aa15.69■□□□□ 0.1
SNX1-213ENST00000561026 PCDHGA9Q9Y5G4 932 aaKnown RBP15.69■□□□□ 0.1
SNX1-213ENST00000561026 E7EQ34 232 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 ZNF749O43361 778 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 OR1I1O60431 355 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 GOT2P00505 430 aaKnown RBP15.68■□□□□ 0.1
SNX1-213ENST00000561026 CHRM5P08912 532 aaPredicted RBP15.68■□□□□ 0.1
SNX1-213ENST00000561026 HBQ1P09105 142 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 OR56A5P0C7T3 313 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 TPBGLP0DKB5 382 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 UGT2B7P16662 529 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 FDFT1P37268 417 aa15.68■□□□□ 0.1
SNX1-213ENST00000561026 GRIA1P42261 906 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms