RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 RPN2P04844 631 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 CHRM3P20309 590 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 ARNTP27540 789 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 AOAHP28039 575 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 CASQ1P31415 396 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 SHMT2P34897 504 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 KPNA2P52292 529 aaKnown RBP12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 HSD11B2P80365 405 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 IL11RAQ14626 422 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 LONRF1Q17RB8 773 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 RNASEH2BQ5TBB1 312 aaKnown RBP12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 ARMC3Q5W041 872 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 ZNF470Q6ECI4 717 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 TTC23LQ6PF05 361 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 FBXO38Q6PIJ6 1188 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 DTX1Q86Y01 620 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 NLGN4XQ8N0W4 816 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 C17orf53Q8N3J3 647 aaPredicted RBP12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 NLGN4YQ8NFZ3 816 aaPredicted RBP12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 NKD1Q969G9 470 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 KIAA1143Q96AT1 154 aaPredicted RBP12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 FAM136AQ96C01 138 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 STAMBPL1Q96FJ0 436 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 TCF12Q99081 682 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 NRTNQ99748 197 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 TRIM31Q9BZY9 425 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 P2RY12Q9H244 342 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 CCDC68Q9H2F9 335 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 TFB2MQ9H5Q4 396 aaKnown RBP12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 C20orf96Q9NUD7 363 aaPredicted RBP12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 SIDT1Q9NXL6 827 aaKnown RBP12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 LNPEPQ9UIQ6 1025 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 RARRES3Q9UL19 164 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 VPS9D1Q9Y2B5 631 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 ITPR1Q14643 2758 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 PIPSLA2A3N6 862 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 SLC9B1P1A6NJY1 282 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 H3BMM5 538 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 CCDC188H7C350 402 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 K7ENP7 123 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 BTN3A3O00478 584 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 ZBTB11O95625 1053 aaPredicted RBP12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 EBLN1P0CF75 366 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 FOLR1P15328 257 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 OGNP20774 298 aaKnown RBP12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 ACADLP28330 430 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 PRDX3P30048 256 aaKnown RBP12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 ACY1Q03154 408 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 BBS9Q3SYG4 887 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 TAF1BQ53T94 588 aaPredicted RBP12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 DNAJC21Q5F1R6 531 aaKnown RBP12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 INO80CQ6PI98 192 aaPredicted RBP12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 SYDE1Q6ZW31 735 aaPredicted RBP12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 KMT5CQ86Y97 462 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 CILP2Q8IUL8 1156 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 VRK3Q8IV63 474 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 SLC22A15Q8IZD6 547 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 OR5K2Q8NHB8 316 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 SLCO2A1Q92959 643 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 SLC41A2Q96JW4 573 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 PPM1MQ96MI6 270 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 KLHL25Q9H0H3 589 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 FGF21Q9NSA1 209 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 RNF14Q9UBS8 474 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 CIDEBQ9UHD4 219 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 PILRAQ9UKJ1 303 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 POMT2Q9UKY4 750 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 PLAGL1Q9UM63 463 aa12.59□□□□□ -0.39
CTDSPL2-209ENST00000560620 TTI1O43156 1089 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 EFSO43281 561 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 NIPSNAP2O75323 286 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 USP1O94782 785 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 KIAA0754O94854 1291 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 ESR1P03372 595 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 RPS3P23396 243 aaKnown RBP eCLIP12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 MAP4P27816 1152 aaKnown RBP12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 PTGIRP43119 386 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 CTBP1Q13363 440 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 GPR19Q15760 415 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 TYSND1Q2T9J0 566 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 CTSL3PQ5NE16 218 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 HP1BP3Q5SSJ5 553 aaPredicted RBP12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 KIAA1614Q5VZ46 1190 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 CNSTQ6PJW8 725 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 UNC5AQ6ZN44 842 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 TMEM135Q86UB9 458 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 UNC5BQ8IZJ1 945 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 PDIK1LQ8N165 341 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 GABPB2Q8TAK5 448 aaPredicted RBP12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 CALML6Q8TD86 181 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 LPGAT1Q92604 370 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 N4BP2L2Q92802 583 aaPredicted RBP12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 SIGLEC10Q96LC7 697 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 FOPNLQ96NB1 174 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 UBL7Q96S82 380 aaPredicted RBP12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 KRT12Q99456 494 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 TRIM51Q9BSJ1 452 aa12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 GPN2Q9H9Y4 310 aaPredicted RBP12.58□□□□□ -0.4
CTDSPL2-209ENST00000560620 FANCEQ9HB96 536 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms