RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 GBX1Q14549 363 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 FASTKD3Q14CZ7 662 aaKnown RBP13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 IGF2-ASQ6U949 168 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 C3orf62Q6ZUJ4 267 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 ANKMY2Q8IV38 441 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 LSMEM2Q8N112 164 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 Q8N9G6 341 aaPredicted RBP13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 OR5K2Q8NHB8 316 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 FAM76AQ8TAV0 307 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 NXPE2Q96DL1 559 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 TRIT1Q9H3H1 467 aaKnown RBP13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 TFB2MQ9H5Q4 396 aaKnown RBP13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 SYNDIG1Q9H7V2 258 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 PLAC1Q9HBJ0 212 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 TAS2R13Q9NYV9 303 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 IL1RAPL1Q9NZN1 696 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 TXNDC16Q9P2K2 825 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 SLC24A2Q9UI40 661 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 ASF1AQ9Y294 204 aa13.64□□□□□ -0.23
PKNOX1-209ENST00000560448 KNTC1P50748 2209 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 MN1Q10571 1320 aaPredicted RBP13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 GOLGA6L10A6NI86 522 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 CSO75390 466 aaKnown RBP13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 PHBP35232 272 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 CCNFP41002 786 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 CAPZBP47756 277 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 LIMK2P53671 638 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 IFFO1Q0D2I5 559 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 TARDBPQ13148 414 aaKnown RBP eCLIP13.63□□□□□ -0.232e-12■■■■□ 26.2
PKNOX1-209ENST00000560448 RTP5Q14D33 572 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 PLCL1Q15111 1095 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 KYNUQ16719 465 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 KRT71Q3SY84 523 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 TNFAIP8L3Q5GJ75 292 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 HP1BP3Q5SSJ5 553 aaPredicted RBP13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 FAM45BPQ6NSW5 357 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 TTC23LQ6PF05 361 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 CROCCP2Q86T23 111 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 OOSP2Q86WS3 158 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 SLITRK4Q8IW52 837 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 LILRA3Q8N6C8 439 aaPredicted RBP13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 FAM45AQ8TCE6 357 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 NAT14Q8WUY8 206 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 TLCD1Q96CP7 247 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 PGM2Q96G03 612 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 ZDHHC12Q96GR4 267 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 CD180Q99467 661 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 CMKLR1Q99788 373 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 AARSD1Q9BTE6 412 aaKnown RBP13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 RAB11FIP5Q9BXF6 653 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 ROPN1BQ9BZX4 212 aaPredicted RBP13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 ROPN1Q9HAT0 212 aaPredicted RBP13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 FBXO6Q9NRD1 293 aaPredicted RBP13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 DKK4Q9UBT3 224 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 FAM8A1Q9UBU6 413 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 KLK13Q9UKR3 277 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 CDYLQ9Y232 598 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 PCDHGA8Q9Y5G5 932 aa13.63□□□□□ -0.23
PKNOX1-209ENST00000560448 CCDC187A0A096LP49 1063 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 TCRBV9S1A1TA0A576 114 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 TMEM8BA6NDV4 472 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 IQCF5A8MTL0 148 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 HAUS5O94927 633 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 C9P02748 559 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 AHSGP02765 367 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 PROS1P07225 676 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 ABHD2P08910 425 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 ANKRD34CP0C6C1 535 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 PDHA2P29803 388 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 SHMT2P34897 504 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 PREPP48147 710 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 CLCN7P51798 805 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 MPP1Q00013 466 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 AMZ1Q400G9 498 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 CYB5D1Q6P9G0 228 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 TRMT10BQ6PF06 316 aaKnown RBP13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 DCUN1D3Q8IWE4 304 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 RAB42Q8N4Z0 105 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 ZBTB2Q8N680 514 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 SPDYE1Q8NFV5 336 aaPredicted RBP13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 WDR36Q8NI36 951 aaKnown RBP13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 INPP5DQ92835 1189 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 FERD3LQ96RJ6 166 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 CPNE1Q99829 537 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 B3GNT4Q9C0J1 378 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 ZMYND15Q9H091 742 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 DHRS7Q9Y394 339 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 ENTPD2Q9Y5L3 495 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 UNC13CQ8NB66 2214 aa13.62□□□□□ -0.23
PKNOX1-209ENST00000560448 COL27A1Q8IZC6 1860 aaPredicted RBP13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 NIPSNAP2O75323 286 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 DXOO77932 396 aaKnown RBP13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 ACSL3O95573 720 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 THRAP10827 490 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 SSTR1P30872 391 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 RGS4P49798 205 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 PDX1P52945 283 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 CSE1LP55060 971 aaKnown RBP13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 PRKAA1Q13131 559 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms