RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 LRRK2Q5S007 2527 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 NBASA2RRP1 2371 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 IGHV5-51A0A0C4DH38 117 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 OR5K3A6NET4 321 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 MGAT4DA6NG13 374 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 OR2AG2A6NM03 316 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 C2orf81A6NN90 581 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 H7C0C1 242 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 MATN2O00339 956 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 DNALI1O14645 258 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-214ENST00000560402 GPR39O43194 453 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 UGT1A9O60656 530 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 CPNE3O75131 537 aaKnown RBP13.23□□□□□ -0.29
SMAD3-214ENST00000560402 KATNA1O75449 491 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 SLC35G4P0C7Q5 338 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 UGT1A6P19224 532 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 LPOP22079 712 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-214ENST00000560402 UGT1A1P22309 533 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 UGT1A4P22310 534 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 ATP5OP48047 213 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 ITGA8P53708 1063 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 HSD11B2P80365 405 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 PDE1BQ01064 536 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 ERV3-1Q14264 604 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 MORF4L2Q15014 288 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 TAF1AQ15573 450 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-214ENST00000560402 OASLQ15646 514 aaKnown RBP13.23□□□□□ -0.29
SMAD3-214ENST00000560402 COLEC12Q5KU26 742 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 DARS2Q6PI48 645 aaKnown RBP13.23□□□□□ -0.29
SMAD3-214ENST00000560402 FAM83HQ6ZRV2 1179 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-214ENST00000560402 CCDC25Q86WR0 208 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 OR2L2Q8NH16 312 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 ULK4Q96C45 1275 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 MAP3K3Q99759 626 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 CCDC77Q9BR77 488 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 GPR87Q9BY21 358 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 TWSG1Q9GZX9 223 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 KIR3DX1Q9H7L2 352 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 UGT1A7Q9HAW7 530 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 UGT1A10Q9HAW8 530 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 UGT1A8Q9HAW9 530 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 LATS2Q9NRM7 1088 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 FGF21Q9NSA1 209 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 PSMD13Q9UNM6 376 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 MAN2B2Q9Y2E5 1009 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 HEBP2Q9Y5Z4 205 aa13.23□□□□□ -0.29
SMAD3-214ENST00000560402 UBA6A0AVT1 1052 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-214ENST00000560402 CDC14CA4D256 554 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 C5orf60A6NFR6 353 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 STK10O94804 968 aaKnown RBP13.22□□□□□ -0.29
SMAD3-214ENST00000560402 TIAF1O95411 115 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 ZBTB11O95625 1053 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-214ENST00000560402 SYF2O95926 243 aaKnown RBP13.22□□□□□ -0.29
SMAD3-214ENST00000560402 IFNB1P01574 187 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 NUDT17P0C025 328 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 RBP3P10745 1247 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 RALBP11234 206 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 FOLR1P15328 257 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 PBLDP30039 288 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-214ENST00000560402 VPS41P49754 854 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 PPP1CAP62136 330 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 ADCY2Q08462 1091 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 GPS1Q13098 491 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 TRIP13Q15645 432 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-214ENST00000560402 P3H1Q32P28 736 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 FNBP1LQ5T0N5 605 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 TMTC4Q5T4D3 741 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 PWWP2BQ6NUJ5 590 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 ARMC6Q6NXE6 501 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 PPP1R21Q6ZMI0 780 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 SYVN1Q86TM6 617 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 D2HGDHQ8N465 521 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 HM13Q8TCT9 377 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 ZNF398Q8TD17 642 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 HEXDCQ8WVB3 486 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 THAP4Q8WY91 577 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 C12orf66Q96MD2 445 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 FICDQ9BVA6 458 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 PHACTR1Q9C0D0 580 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 ACTL8Q9H568 366 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 FANCEQ9HB96 536 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 ANKMY1Q9P2S6 941 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 BTRCQ9Y297 605 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 AAR2Q9Y312 384 aaKnown RBP13.22□□□□□ -0.29
SMAD3-214ENST00000560402 COLEC10Q9Y6Z7 277 aa13.22□□□□□ -0.29
SMAD3-214ENST00000560402 COL12A1Q99715 3063 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 PIPSLA2A3N6 862 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 CFAP99D6REC4 459 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 F5H423 210 aaPredicted RBP13.21□□□□□ -0.29
SMAD3-214ENST00000560402 AGPSO00116 658 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 BUD23O43709 281 aaKnown RBP13.21□□□□□ -0.29
SMAD3-214ENST00000560402 SRP72O76094 671 aaKnown RBP13.21□□□□□ -0.29
SMAD3-214ENST00000560402 CRTAMO95727 393 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 FURINP09958 794 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 EBLN1P0CF75 366 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 PTPN4P29074 926 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 ATP5DP30049 168 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 CD97P48960 835 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 PRLHRP49683 370 aa13.21□□□□□ -0.29
SMAD3-214ENST00000560402 RPS15P62841 145 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms