RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	SLC14A2	Q15849	920 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	RPE65	Q16518	533 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	PPP2R5E	Q16537	467 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	SKIDA1	Q1XH10	827 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	TFDP3	Q5H9I0	405 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	FNBP1L	Q5T0N5	605 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	GPRC6A	Q5T6X5	926 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	AGAP9	Q5VTM2	703 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	CACHD1	Q5VU97	1274 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	IRGC	Q6NXR0	463 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	AADACL2	Q6P093	401 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	DUS1L	Q6P1R4	473 aa	Known RBP	6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	BZW1	Q7L1Q6	419 aa	Known RBP	6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	GLT6D1	Q7Z4J2	308 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	TMEM135	Q86UB9	458 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	AMZ2	Q86W34	360 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	RASGRP3	Q8IV61	690 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	KATNAL2	Q8IYT4	538 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	RCOR2	Q8IZ40	523 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	SHISA5	Q8N114	240 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	UBE2Q2	Q8WVN8	375 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	STARD8	Q92502	1023 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	KIAA1143	Q96AT1	154 aa	Predicted RBP	6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	SLC45A3	Q96JT2	553 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	TTC25	Q96NG3	672 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	TEFM	Q96QE5	360 aa	Known RBP	6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	VPS35	Q96QK1	796 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	FCRL5	Q96RD9	977 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	NRTN	Q99748	197 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	TIMM29	Q9BSF4	260 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	ULBP3	Q9BZM4	244 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	SLC25A18	Q9H1K4	315 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	EPB41L1	Q9H4G0	881 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	FAM96A	Q9H5X1	160 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	CLMP	Q9H6B4	373 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	UCK1	Q9HA47	277 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	RSPH14	Q9UHP6	348 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	TMEM184B	Q9Y519	407 aa	Predicted RBP	6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	RPS6KL1	Q9Y6S9	549 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	LRRK2	Q5S007	2527 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	PTPN13	Q12923	2485 aa		6.84	□□□□□ -1.32
MARK3-215	ENST00000558787	COL12A1	Q99715	3063 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	UTP20	O75691	2785 aa	Known RBP	6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	MACROD2	A1Z1Q3	448 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	GPR89A	B7ZAQ6	455 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787		K7EM74	188 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	STX7	O15400	261 aa	Known RBP	6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	MTSS1	O43312	755 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	KIF5C	O60282	957 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	PPFIA2	O75334	1257 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	TUBB4A	P04350	444 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	POLB	P06746	335 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	ANKRD34C	P0C6C1	535 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	GPR89B	P0CG08	455 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	FOLR1	P15328	257 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	VCL	P18206	1134 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	RAB6A	P20340	208 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	AKT1	P31749	480 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	DLST	P36957	453 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	STAT5A	P42229	794 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	TNNT3	P45378	269 aa	Predicted RBP	6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	CCR10	P46092	362 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	CAPZB	P47756	277 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	ARCN1	P48444	511 aa	Known RBP	6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	HADHB	P55084	474 aa	Known RBP	6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	NAP1L1	P55209	391 aa	Known RBP	6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	TMPRSS15	P98073	1019 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	OTUD4	Q01804	1114 aa	Known RBP	6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	ABHD18	Q0P651	414 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	CDC20	Q12834	499 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	ERV3-1	Q14264	604 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	IGFBP7	Q16270	282 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	LDLRAP1	Q5SW96	308 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	CCDC181	Q5TID7	509 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	PWWP2B	Q6NUJ5	590 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	FBXO38	Q6PIJ6	1188 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	C6orf15	Q6UXA7	325 aa	Predicted RBP	6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	WASH2P	Q6VEQ5	465 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	ATG14	Q6ZNE5	492 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	BBS12	Q6ZW61	710 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	DAAM2	Q86T65	1068 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	REXO1L1P	Q8IX06	675 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	LILRA3	Q8N6C8	439 aa	Predicted RBP	6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	AVL9	Q8NBF6	648 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	OR4K2	Q8NGD2	314 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	ACTL9	Q8TC94	416 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	ZNF398	Q8TD17	642 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	BRSK1	Q8TDC3	778 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	KLHL6	Q8WZ60	621 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	ZDHHC12	Q96GR4	267 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	PPM1M	Q96MI6	270 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	ALS2CR12	Q96Q35	445 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	SRPK1	Q96SB4	655 aa	Known RBP	6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	RUFY1	Q96T51	708 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	ZPBP	Q9BS86	351 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	FSD1L	Q9BXM9	530 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	WWP1	Q9H0M0	922 aa		6.83	□□□□□ -1.32
MARK3-215	ENST00000558787	TRABD	Q9H4I3	376 aa		6.83	□□□□□ -1.32

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms