RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 COPS8Q99627 209 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 GPR21Q99679 349 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 ZNF471Q9BX82 626 aaPredicted RBP13.75□□□□□ -0.21
SPG11-210ENST00000558319 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.75□□□□□ -0.21
SPG11-210ENST00000558319 ARL5AQ9Y689 179 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 GRM6O15303 877 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 MTX2O75431 263 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 CCNB2O95067 398 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 KCNJ5P48544 419 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 ZDHHC21Q8IVQ6 265 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 OR5J2Q8NH18 312 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 COQ8AQ8NI60 647 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 CST3P01034 146 aaPredicted RBP13.75□□□□□ -0.21
SPG11-210ENST00000558319 TUBG1P23258 451 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 IL12BP29460 328 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 TLR1Q15399 786 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 ARSJQ5FYB0 599 aaPredicted RBP13.75□□□□□ -0.21
SPG11-210ENST00000558319 ZNF517Q6ZMY9 492 aaPredicted RBP13.75□□□□□ -0.21
SPG11-210ENST00000558319 SPATC1Q76KD6 591 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 IQCKQ8N0W5 287 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 UROC1Q96N76 676 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 ANKRA2Q9H9E1 313 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 MCCC2Q9HCC0 563 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 RPH3AQ9Y2J0 694 aaPredicted RBP13.75□□□□□ -0.21
SPG11-210ENST00000558319 NR2E1Q9Y466 385 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 HSD3B2P26439 372 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 SLC38A3Q99624 504 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 PLEKHA1Q9HB21 404 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 POMPQ9Y244 141 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 C22orf31O95567 290 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 SLC9A3P48764 834 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 CRYBB1P53674 252 aaPredicted RBP13.74□□□□□ -0.21
SPG11-210ENST00000558319 S100A10P60903 97 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 VLDLRP98155 873 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 PITPNAQ00169 270 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 HDDC3Q8N4P3 179 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 CLEC4CQ8WTT0 213 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 MND1Q9BWT6 205 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 PLAGL1Q9UM63 463 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 MAN2B2Q9Y2E5 1009 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 HIF3AQ9Y2N7 669 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 ITSN1Q15811 1721 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 BTNL10A8MVZ5 291 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 ASGR1P07306 291 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 MSL3P1P0C860 447 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 GSTT2BP0CG30 244 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 ACTR3P61158 418 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 PHF19Q5T6S3 580 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 CHSY3Q70JA7 882 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 ANKFN1Q8N957 763 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 CCDC54Q8NEL0 328 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 DUSP16Q9BY84 665 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 TRPV4Q9HBA0 871 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 C3orf14Q9HBI5 128 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 NKX1-2Q9UD57 310 aaPredicted RBP13.74□□□□□ -0.21
SPG11-210ENST00000558319 MED31Q9Y3C7 131 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 PER2O15055 1255 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 LDB2O43679 373 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 NME6O75414 186 aaPredicted RBP13.74□□□□□ -0.21
SPG11-210ENST00000558319 PPIBP23284 216 aaKnown RBP13.74□□□□□ -0.21
SPG11-210ENST00000558319 KIR3DL1P43629 444 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 ATP6V0D1P61421 351 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 BTBD16Q32M84 506 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 GALNT13Q8IUC8 556 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 ERI1Q8IV48 349 aaKnown RBP13.74□□□□□ -0.21
SPG11-210ENST00000558319 MSANTD3Q96H12 275 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 TTTY10Q9BZA0 68 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 POLR2J2Q9GZM3 115 aaKnown RBP13.74□□□□□ -0.21
SPG11-210ENST00000558319 TCF7L1Q9HCS4 588 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 FBXL3Q9UKT7 428 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 TTC34A8MYJ7 566 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 EI24O14681 340 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 FSCN2O14926 492 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 CCNOP22674 350 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 CPN2P22792 545 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 HOXC12P31275 282 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 NR0B1P51843 470 aaKnown RBP13.74□□□□□ -0.21
SPG11-210ENST00000558319 PPP3R1P63098 170 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 TUBA3CQ13748 450 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 SH3D19Q5HYK7 790 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 CDKL4Q5MAI5 379 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 KXD1Q9BQD3 176 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 FBXO9Q9UK97 447 aaPredicted RBP13.74□□□□□ -0.21
SPG11-210ENST00000558319 KCNE2Q9Y6J6 123 aa13.74□□□□□ -0.21
SPG11-210ENST00000558319 TRAFD1O14545 582 aaPredicted RBP13.73□□□□□ -0.21
SPG11-210ENST00000558319 EIF1AYO14602 144 aaKnown RBP13.73□□□□□ -0.21
SPG11-210ENST00000558319 CYP2C18P33260 490 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 PRKCDQ05655 676 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 IQCHQ86VS3 1027 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 ZBTB2Q8N680 514 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 TMED9Q9BVK6 235 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 DEC1Q9P2X7 70 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 MTRRQ9UBK8 725 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 LINGO3P0C6S8 592 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 DHPSP49366 369 aaPredicted RBP13.73□□□□□ -0.21
SPG11-210ENST00000558319 GLUD2P49448 558 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 SEMA3AQ14563 771 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 ZYG11AQ6WRX3 759 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 RAB11FIP2Q7L804 512 aa13.73□□□□□ -0.21
SPG11-210ENST00000558319 RASGRP3Q8IV61 690 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms