RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 GULP1Q9UBP9 304 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 RAB21Q9UL25 225 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 PSMD13Q9UNM6 376 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 PCDHB1Q9Y5F3 818 aa11.78□□□□□ -0.52
HMGB1P8-201ENST00000558211 FAM186AA6NE01 2351 aa11.77□□□□□ -0.52
HMGB1P8-201ENST00000558211 FRYLO94915 3013 aa11.77□□□□□ -0.52
HMGB1P8-201ENST00000558211 LAMA1P25391 3075 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 PDZK1P1A8MUH7 402 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 B4DGG1 531 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 LMO7DNF2Z398 122 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 PCDHGA12O60330 932 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 C1QAP02745 245 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 ESR1P03372 595 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 TUBBP07437 444 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 MYF5P13349 255 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 IDSP22304 550 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 CCR7P32248 378 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 PREPP48147 710 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 LRP8Q14114 963 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 SYTL3Q4VX76 610 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 EMBQ6PCB8 327 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 KANSL1Q7Z3B3 1105 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 SLC26A11Q86WA9 606 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 SFTPA2Q8IWL1 248 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 OR2L2Q8NH16 312 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 ELMO2Q96JJ3 720 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 PANX3Q96QZ0 392 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 CPNE1Q99829 537 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 AARSD1Q9BTE6 412 aaKnown RBP11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 ACSS3Q9H6R3 686 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 GALPQ9UBC7 116 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 TBC1D29Q9UFV1 150 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 BTBD3Q9Y2F9 522 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 CSNK1G3Q9Y6M4 447 aa11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 PTPRZ1P23471 2315 aaPredicted RBP11.77□□□□□ -0.53
HMGB1P8-201ENST00000558211 ARID1BQ8NFD5 2236 aaPredicted RBP11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 WDR87Q6ZQQ6 2873 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 EXOC1LA0A1B0GW35 172 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 H3BMM5 538 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 TRIM38O00635 465 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 SH3BP5O60239 455 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 EML2O95834 649 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 ZNF883P0CG24 379 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 GIMD1P0DJR0 217 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 ALPPL2P10696 532 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 CD59P13987 128 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 GP5P40197 560 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 CLCNKAP51800 687 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 PGGT1BP53609 377 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 ADARP55265 1226 aaKnown RBP11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 HSPA14Q0VDF9 509 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 KLHL38Q2WGJ6 581 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 MAP9Q49MG5 647 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 GRTP1Q5TC63 336 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 HECTD2Q5U5R9 776 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 ZNF449Q6P9G9 518 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 OTOAQ7RTW8 1153 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 ZC3HC1Q86WB0 502 aaKnown RBP11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 SIDT2Q8NBJ9 832 aaKnown RBP11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 GALNT11Q8NCW6 608 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 ACVR1CQ8NER5 493 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 MYRIPQ8NFW9 859 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 HM13Q8TCT9 377 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 PATE1Q8WXA2 126 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 LINC00615Q96LM1 132 aaPredicted RBP11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 CAMK1GQ96NX5 476 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 WWP1Q9H0M0 922 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 EPB41L4BQ9H329 900 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 COG4Q9H9E3 785 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 MTO1Q9Y2Z2 717 aaKnown RBP11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 IKBKGQ9Y6K9 419 aa11.76□□□□□ -0.53
HMGB1P8-201ENST00000558211 GOLGA4Q13439 2230 aaKnown RBP11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 C17orf113A0A1B0GUU1 675 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 FAM95CA0A1B0GW59 222 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 FLRT2O43155 660 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 SIGLEC6O43699 453 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 KCNJ13O60928 360 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 VPS26AO75436 327 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 APOA4P06727 396 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 INHBAP08476 426 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 ABHD2P08910 425 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 PDHA2P29803 388 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 SPRP35270 261 aaPredicted RBP11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 HSD17B3P37058 310 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 MSH2P43246 934 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 GRK6P43250 576 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 CDKN2DP55273 166 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 SLC14A1Q13336 389 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 BIRC2Q13490 618 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 NAB1Q13506 487 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 TMED2Q15363 201 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 INAVAQ3KP66 663 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 METRNLQ641Q3 311 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 FAM45BPQ6NSW5 357 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 LVRNQ6Q4G3 990 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 GALNT7Q86SF2 657 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 CD163Q86VB7 1156 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 SDR16C5Q8N3Y7 309 aa11.75□□□□□ -0.53
HMGB1P8-201ENST00000558211 OR4C6Q8NH72 309 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms