RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 OPTCQ9UBM4 332 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 KANSL1LA0AUZ9 987 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 CCDC22O60826 627 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 KATNA1O75449 491 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 SFSWAPQ12872 951 aaKnown RBP19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 LETMD1Q6P1Q0 360 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 GPRIN3Q6ZVF9 776 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 AMZ2Q86W34 360 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 RASGRP3Q8IV61 690 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 C3orf30Q96M34 536 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 APOOQ9BUR5 198 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 ATG10Q9H0Y0 220 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 EBF2Q9HAK2 575 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 USP36Q9P275 1121 aaKnown RBP19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 WNT16Q9UBV4 365 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 MOSPD1Q9UJG1 213 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 PSMD13Q9UNM6 376 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 BTRCQ9Y297 605 aa19.93■□□□□ 0.78
SNRPA1-205ENST00000558036 PABPN1LA6NDY0 278 aaKnown RBP19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 LRRC72A6NJI9 287 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 TRPC5OSA6NMA1 111 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 SLC16A5O15375 505 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 CRCPO75575 148 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 OR4F21O95013 312 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 ESRRBO95718 433 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 FGF4P08620 206 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 ERVPABLB-1P60509 514 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 LRRC32Q14392 662 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 TCHHL1Q5QJ38 904 aaPredicted RBP19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 KANK2Q63ZY3 851 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 CHST15Q7LFX5 561 aaPredicted RBP19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 AFAP1L2Q8N4X5 818 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 CDYL2Q8N8U2 506 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 HM13Q8TCT9 377 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 TWIST2Q8WVJ9 160 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 ATP6V1E2Q96A05 226 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 FAR2Q96K12 515 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 TPSD1Q9BZJ3 242 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 KLC4Q9NSK0 619 aa19.92■□□□□ 0.78
SNRPA1-205ENST00000558036 A0A0C4DFX4 3053 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 C17orf113A0A1B0GUU1 675 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 PRR5-ARHGAP8B1AHC4 643 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 CHURC1-FNTBB4DL54 471 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 STK16O75716 305 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 SEMA4FO95754 770 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 CEACAM5P06731 702 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 MAP4P27816 1152 aaKnown RBP19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 TEAD1P28347 426 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 PXNP49023 591 aaPredicted RBP19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 ACAD11Q709F0 780 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 FAM160A2Q8N612 972 aaPredicted RBP19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 TSTD1Q8NFU3 115 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 RLN3Q8WXF3 142 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 TUBB1Q9H4B7 451 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 C6orf106Q9H6K1 298 aaPredicted RBP19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 MEAF6Q9HAF1 191 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 MRPS17Q9Y2R5 130 aaKnown RBP19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 ANGPTL3Q9Y5C1 460 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 K7EPI3 171 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 PIP5K1BO14986 540 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 DCXO43602 365 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 RPL10P27635 214 aaKnown RBP19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 STARD6P59095 220 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 NCALDP61601 193 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 TRIM69Q86WT6 500 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 DDIASQ8IXT1 998 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 UBTD2Q8WUN7 234 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 C19orf60Q96EN9 201 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 TOE1Q96GM8 510 aaKnown RBP19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 ZNF382Q96SR6 550 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 CCDC106Q9BWC9 280 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 PLEKHM1Q9Y4G2 1056 aa19.91■□□□□ 0.78
SNRPA1-205ENST00000558036 CAPN14A8MX76 684 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 STK25O00506 426 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 GIPC1O14908 333 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 UNC5CO95185 931 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 ACP5P13686 325 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 ITPKAP23677 461 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 CDKL1Q00532 357 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 PTCHD3Q3KNS1 767 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 SCIMPQ6UWF3 145 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 SYNPOQ8N3V7 929 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 OR4F6Q8NGB9 312 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 MAELQ96JY0 434 aaKnown RBP19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 FOPNLQ96NB1 174 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 SGK2Q9HBY8 427 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 GIMAP2Q9UG22 337 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 CATP04040 527 aaKnown RBP19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 ENO1P06733 434 aaKnown RBP19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 LINC00032P0C843 101 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 CD1EP15812 388 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 AP1S2P56377 157 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 TRAF3Q13114 568 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 TCEA2Q15560 299 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 TPRG1LQ5T0D9 272 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 LMNTD1Q8N9Z9 388 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 CATSPER2Q96P56 530 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 OR52A5Q9H2C5 316 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 FGF22Q9HCT0 170 aa19.9■□□□□ 0.78
SNRPA1-205ENST00000558036 CFAP20Q9Y6A4 193 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms