RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 FDXRP22570 491 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 MCM3P25205 808 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 CFHR1Q03591 330 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 TARDBPQ13148 414 aaKnown RBP eCLIP24.86■■□□□ 1.573e-10■■■■■ 46.7
SMAD6-202ENST00000557916 CCNI2Q6ZMN8 369 aaPredicted RBP24.86■■□□□ 1.57
SMAD6-202ENST00000557916 TRMT10CQ7L0Y3 403 aaKnown RBP24.86■■□□□ 1.57
SMAD6-202ENST00000557916 TMPRSS9Q7Z410 1059 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 MARCH9Q86YJ5 346 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 CPNE9Q8IYJ1 553 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 RBBP8Q99708 897 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 OLFM1Q99784 485 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 SCNM1Q9BWG6 230 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 OGFRQ9NZT2 677 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 KLK13Q9UKR3 277 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 RUVBL2Q9Y230 463 aaKnown RBP24.86■■□□□ 1.57
SMAD6-202ENST00000557916 TDRKHQ9Y2W6 561 aaKnown RBP24.86■■□□□ 1.57
SMAD6-202ENST00000557916 NFS1Q9Y697 457 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 UNC13CQ8NB66 2214 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 CSO75390 466 aaKnown RBP24.86■■□□□ 1.57
SMAD6-202ENST00000557916 CBSLP0DN79 551 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 SPINK2P20155 84 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 SAT1P21673 171 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 CSF2RBP32927 897 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 CBSP35520 551 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 PMS2P54278 862 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 PDAP1Q13442 181 aaKnown RBP24.86■■□□□ 1.57
SMAD6-202ENST00000557916 ISXQ2M1V0 245 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 GRTP1Q5TC63 336 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 PAQR3Q6TCH7 311 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 OR52E1Q8NGJ3 308 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 LCN9Q8WX39 176 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.86■■□□□ 1.57
SMAD6-202ENST00000557916 DPYSL5Q9BPU6 564 aa24.86■■□□□ 1.57
SMAD6-202ENST00000557916 TFB2MQ9H5Q4 396 aaKnown RBP24.86■■□□□ 1.57
SMAD6-202ENST00000557916 MTO1Q9Y2Z2 717 aaKnown RBP24.86■■□□□ 1.57
SMAD6-202ENST00000557916 MATN4O95460 622 aa24.85■■□□□ 1.57
SMAD6-202ENST00000557916 ENO3P13929 434 aaPredicted RBP24.85■■□□□ 1.57
SMAD6-202ENST00000557916 HOXB3P14651 431 aaPredicted RBP24.85■■□□□ 1.57
SMAD6-202ENST00000557916 SPRP35270 261 aaPredicted RBP24.85■■□□□ 1.57
SMAD6-202ENST00000557916 PDX1P52945 283 aa24.85■■□□□ 1.57
SMAD6-202ENST00000557916 ERCC6LQ2NKX8 1250 aa24.85■■□□□ 1.57
SMAD6-202ENST00000557916 KLHL35Q6PF15 583 aa24.85■■□□□ 1.57
SMAD6-202ENST00000557916 WDR74Q6RFH5 385 aaPredicted RBP24.85■■□□□ 1.57
SMAD6-202ENST00000557916 ZNF574Q6ZN55 896 aaPredicted RBP24.85■■□□□ 1.57
SMAD6-202ENST00000557916 NEK10Q6ZWH5 1172 aa24.85■■□□□ 1.57
SMAD6-202ENST00000557916 OR4E2Q8NGC2 313 aa24.85■■□□□ 1.57
SMAD6-202ENST00000557916 RSC1A1Q92681 617 aa24.85■■□□□ 1.57
SMAD6-202ENST00000557916 MRRFQ96E11 262 aaKnown RBP24.85■■□□□ 1.57
SMAD6-202ENST00000557916 TXLNGYQ9BZA5 131 aa24.85■■□□□ 1.57
SMAD6-202ENST00000557916 EIF3FO00303 357 aaPredicted RBP24.84■■□□□ 1.57
SMAD6-202ENST00000557916 FAM155BO75949 473 aa24.84■■□□□ 1.57
SMAD6-202ENST00000557916 MPC1LP0DKB6 136 aa24.84■■□□□ 1.57
SMAD6-202ENST00000557916 CAPZBP47756 277 aa24.84■■□□□ 1.57
SMAD6-202ENST00000557916 PGGT1BP53609 377 aa24.84■■□□□ 1.57
SMAD6-202ENST00000557916 VSNL1P62760 191 aa24.84■■□□□ 1.57
SMAD6-202ENST00000557916 TMEM71Q6P5X7 295 aa24.84■■□□□ 1.57
SMAD6-202ENST00000557916 B3GNT8Q7Z7M8 397 aa24.84■■□□□ 1.57
SMAD6-202ENST00000557916 DCUN1D3Q8IWE4 304 aa24.84■■□□□ 1.57
SMAD6-202ENST00000557916 OR4D9Q8NGE8 314 aa24.84■■□□□ 1.57
SMAD6-202ENST00000557916 UHMK1Q8TAS1 419 aaKnown RBP24.84■■□□□ 1.57
SMAD6-202ENST00000557916 EEF1AKMT1Q8WVE0 214 aa24.84■■□□□ 1.57
SMAD6-202ENST00000557916 TMEM74Q96NL1 305 aa24.84■■□□□ 1.57
SMAD6-202ENST00000557916 SRMSQ9H3Y6 488 aa24.84■■□□□ 1.57
SMAD6-202ENST00000557916 TMEM9Q9P0T7 183 aa24.84■■□□□ 1.57
SMAD6-202ENST00000557916 PTPRBP23467 1997 aa24.83■■□□□ 1.57
SMAD6-202ENST00000557916 A0A087WUV0 522 aaPredicted RBP24.83■■□□□ 1.57
SMAD6-202ENST00000557916 MPSTP25325 297 aa24.83■■□□□ 1.57
SMAD6-202ENST00000557916 RGS4P49798 205 aa24.83■■□□□ 1.57
SMAD6-202ENST00000557916 LIMK2P53671 638 aa24.83■■□□□ 1.57
SMAD6-202ENST00000557916 INHBCP55103 352 aa24.83■■□□□ 1.57
SMAD6-202ENST00000557916 TAS2R39P59534 338 aa24.83■■□□□ 1.57
SMAD6-202ENST00000557916 TTC23LQ6PF05 361 aa24.83■■□□□ 1.57
SMAD6-202ENST00000557916 SLITRK4Q8IW52 837 aa24.83■■□□□ 1.57
SMAD6-202ENST00000557916 SEMA6CQ9H3T2 930 aa24.83■■□□□ 1.57
SMAD6-202ENST00000557916 SLC39A10Q9ULF5 831 aa24.83■■□□□ 1.57
SMAD6-202ENST00000557916 ENTPD2Q9Y5L3 495 aa24.83■■□□□ 1.57
SMAD6-202ENST00000557916 NCOR2Q9Y618 2525 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 FAM221BA6H8Z2 402 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 TMX2-CTNND1H3BSU7 103 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 RIPK2O43353 540 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 KDM1AO60341 852 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 C1orf105O95561 183 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 TPBGLP0DKB5 382 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 CCNFP41002 786 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 SLC12A2P55011 1212 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 POU4F1Q01851 419 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 ZFP36L1Q07352 338 aaKnown RBP24.82■■□□□ 1.56
SMAD6-202ENST00000557916 LRRC8EQ6NSJ5 796 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 CYHR1Q6ZMK1 362 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 PIWIL4Q7Z3Z4 852 aaKnown RBP24.82■■□□□ 1.56
SMAD6-202ENST00000557916 OOSP2Q86WS3 158 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 PLXDC1Q8IUK5 500 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 GRAMD1AQ96CP6 724 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 GPR22Q99680 433 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 NRTNQ99748 197 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 XKR8Q9H6D3 395 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 HRASLS2Q9NWW9 162 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 NEUROG3Q9Y4Z2 214 aa24.82■■□□□ 1.56
SMAD6-202ENST00000557916 COL27A1Q8IZC6 1860 aaPredicted RBP24.82■■□□□ 1.56
SMAD6-202ENST00000557916 IGHV5-10-1A0A0J9YXX1 117 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms