RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SLC1A1P43005 524 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 GEMP55040 296 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 MSLNQ13421 630 aaPredicted RBP13.63□□□□□ -0.23
SLIRP-210ENST00000557431 BRD3Q15059 726 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 TFDP3Q5H9I0 405 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 MED25Q71SY5 747 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 BZW1Q7L1Q6 419 aaKnown RBP13.63□□□□□ -0.23
SLIRP-210ENST00000557431 RAB43Q86YS6 212 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 NXPE1Q8N323 547 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 ZFPM2Q8WW38 1151 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 DNAJC1Q96KC8 554 aaKnown RBP13.63□□□□□ -0.23
SLIRP-210ENST00000557431 CCDC42Q96M95 316 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 PITPNM3Q9BZ71 974 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 G3BP2Q9UN86 482 aaKnown RBP13.63□□□□□ -0.23
SLIRP-210ENST00000557431 ICKQ9UPZ9 632 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 PCDHGB7Q9Y5F8 929 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 ALG6Q9Y672 507 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 POLEQ07864 2286 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 SCN2AQ99250 2005 aa13.63□□□□□ -0.23
SLIRP-210ENST00000557431 PSTPIP1O43586 416 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 MFAP3LO75121 409 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 ATP1B2P14415 290 aaPredicted RBP13.62□□□□□ -0.23
SLIRP-210ENST00000557431 ZNF140P52738 457 aaPredicted RBP13.62□□□□□ -0.23
SLIRP-210ENST00000557431 RRADP55042 308 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 OTUD4Q01804 1114 aaKnown RBP13.62□□□□□ -0.23
SLIRP-210ENST00000557431 SKOR2Q2VWA4 1001 aaPredicted RBP13.62□□□□□ -0.23
SLIRP-210ENST00000557431 ZNF658BQ4V348 819 aaPredicted RBP13.62□□□□□ -0.23
SLIRP-210ENST00000557431 ZRANB3Q5FWF4 1079 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 VWA5B1Q5TIE3 1220 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 AADACL2Q6P093 401 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 RANBP10Q6VN20 620 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 AMIGO1Q86WK6 493 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 IQCKQ8N0W5 287 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 CARFQ8N187 725 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 CLDN19Q8N6F1 224 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 C19orf47Q8N9M1 422 aaKnown RBP13.62□□□□□ -0.23
SLIRP-210ENST00000557431 OR5AR1Q8NGP9 310 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 CCDC110Q8TBZ0 833 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 VAT1Q99536 393 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 COPS8Q99627 209 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 ZNF552Q9H707 407 aaPredicted RBP13.62□□□□□ -0.23
SLIRP-210ENST00000557431 ZNHIT6Q9NWK9 470 aaKnown RBP13.62□□□□□ -0.23
SLIRP-210ENST00000557431 PIH1D1Q9NWS0 290 aaKnown RBP13.62□□□□□ -0.23
SLIRP-210ENST00000557431 SPHK1Q9NYA1 384 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 CIDEBQ9UHD4 219 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 SERTAD3Q9UJW9 196 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 KLHL20Q9Y2M5 609 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 HEBP2Q9Y5Z4 205 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 PRSS21Q9Y6M0 314 aa13.62□□□□□ -0.23
SLIRP-210ENST00000557431 CPAMD8Q8IZJ3 1885 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 AGAP14A8MT82 685 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 H3BMH7 237 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 IFRD1O00458 451 aaPredicted RBP13.61□□□□□ -0.23
SLIRP-210ENST00000557431 DDAH2O95865 285 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 RALBP11234 206 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 UGT2B7P16662 529 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 ITGALP20701 1170 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 AGXTP21549 392 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 FOLR3P41439 243 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 GLRBP48167 497 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 GABRA4P48169 554 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 ANKRD20A2Q5SQ80 823 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 ANKRD20A1Q5TYW2 823 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 ANKRD20A3Q5VUR7 823 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 SPESP1Q6UW49 350 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 SNX20Q7Z614 316 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 SERPINA9Q86WD7 417 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 GALNT16Q8N428 558 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 ZNF655Q8N720 491 aaPredicted RBP13.61□□□□□ -0.23
SLIRP-210ENST00000557431 ACTL9Q8TC94 416 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 TFGQ92734 400 aaPredicted RBP13.61□□□□□ -0.23
SLIRP-210ENST00000557431 N4BP2L2Q92802 583 aaPredicted RBP13.61□□□□□ -0.23
SLIRP-210ENST00000557431 CCM2Q9BSQ5 444 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 ILKAPQ9H0C8 392 aaPredicted RBP13.61□□□□□ -0.23
SLIRP-210ENST00000557431 IRAK4Q9NWZ3 460 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 ZDHHC3Q9NYG2 299 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 TRHDEQ9UKU6 1024 aa13.61□□□□□ -0.23
SLIRP-210ENST00000557431 TDRKHQ9Y2W6 561 aaKnown RBP13.61□□□□□ -0.23
SLIRP-210ENST00000557431 CRYBG3Q68DQ2 2970 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 ANKUB1A6NFN9 424 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 OR51F1A6NGY5 319 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 C2orf74A8MZ97 194 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 HACD1B0YJ81 288 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 MATN2O00339 956 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 KCNN4O15554 427 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 OR2B3O76000 313 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 ANXA9O76027 345 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 ZRANB2O95218 330 aaKnown RBP eCLIP13.6□□□□□ -0.23
SLIRP-210ENST00000557431 UMODP07911 640 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 TPBGLP0DKB5 382 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 TPH1P17752 444 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 PEBP1P30086 187 aaKnown RBP13.6□□□□□ -0.23
SLIRP-210ENST00000557431 CSE1LP55060 971 aaKnown RBP13.6□□□□□ -0.23
SLIRP-210ENST00000557431 BOP1Q14137 746 aaKnown RBP13.6□□□□□ -0.23
SLIRP-210ENST00000557431 MYBPC3Q14896 1274 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 HIF1AQ16665 826 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 DCAF10Q5QP82 559 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 CCDC181Q5TID7 509 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 ITPRIPL1Q6GPH6 555 aa13.6□□□□□ -0.23
SLIRP-210ENST00000557431 DENND5AQ6IQ26 1287 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms