RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 PPM1EQ8WY54 764 aa6.62□□□□□ -1.35
LINC00871-204ENST00000556886 PRCCQ92733 491 aaPredicted RBP6.62□□□□□ -1.35
LINC00871-204ENST00000556886 APBB2Q92870 758 aa6.62□□□□□ -1.35
LINC00871-204ENST00000556886 C18orf25Q96B23 403 aaPredicted RBP6.62□□□□□ -1.35
LINC00871-204ENST00000556886 LRRC39Q96DD0 335 aa6.62□□□□□ -1.35
LINC00871-204ENST00000556886 MRPL45Q9BRJ2 306 aaKnown RBP6.62□□□□□ -1.35
LINC00871-204ENST00000556886 RTKNQ9BST9 563 aa6.62□□□□□ -1.35
LINC00871-204ENST00000556886 DDX23Q9BUQ8 820 aaKnown RBP6.62□□□□□ -1.35
LINC00871-204ENST00000556886 MECRQ9BV79 373 aa6.62□□□□□ -1.35
LINC00871-204ENST00000556886 FAM49AQ9H0Q0 323 aaPredicted RBP6.62□□□□□ -1.35
LINC00871-204ENST00000556886 UPF3AQ9H1J1 476 aaKnown RBP6.62□□□□□ -1.35
LINC00871-204ENST00000556886 ZWILCHQ9H900 591 aa6.62□□□□□ -1.35
LINC00871-204ENST00000556886 ACTR5Q9H9F9 607 aaPredicted RBP6.62□□□□□ -1.35
LINC00871-204ENST00000556886 SAYSD1Q9NPB0 183 aa6.62□□□□□ -1.35
LINC00871-204ENST00000556886 RRN3Q9NYV6 651 aa6.62□□□□□ -1.35
LINC00871-204ENST00000556886 GRHPRQ9UBQ7 328 aa6.62□□□□□ -1.35
LINC00871-204ENST00000556886 HMGXB4Q9UGU5 601 aa6.62□□□□□ -1.35
LINC00871-204ENST00000556886 NAALADL1Q9UQQ1 740 aa6.62□□□□□ -1.35
LINC00871-204ENST00000556886 PIN4Q9Y237 131 aaKnown RBP6.62□□□□□ -1.35
LINC00871-204ENST00000556886 TRPV2Q9Y5S1 764 aa6.62□□□□□ -1.35
LINC00871-204ENST00000556886 SIRT4Q9Y6E7 314 aaPredicted RBP6.62□□□□□ -1.35
LINC00871-204ENST00000556886 PDCD11Q14690 1871 aaKnown RBP6.62□□□□□ -1.35
LINC00871-204ENST00000556886 SF3B1O75533 1304 aaKnown RBP eCLIP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 GOLGA6L7A0A1B0GV03 622 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 EXOC1LA0A1B0GW35 172 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 ARHGEF37A1IGU5 675 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 TRDMT1O14717 391 aaKnown RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 DSCR3O14972 297 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 NKX2-8O15522 239 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 PAPSS1O43252 624 aaPredicted RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 ACTL6BO94805 426 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 TACR3P29371 465 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 RPL9P32969 192 aaKnown RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 IDUAP35475 653 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 ABCG1P45844 678 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 LHX1P48742 406 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 CTCFP49711 727 aaPredicted RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 PNLIPRP1P54315 467 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 FAM3BP58499 235 aaPredicted RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 MRPS6P82932 125 aaKnown RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 CDK16Q00536 496 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 ROR1Q01973 937 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 RNASELQ05823 741 aaKnown RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 SF3A3Q12874 501 aaKnown RBP eCLIP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 KRT81Q14533 505 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 DPYSL2Q16555 572 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 TRIM60Q495X7 471 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 LACTB2Q53H82 288 aaPredicted RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 MFSD14CQ5VZR4 134 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 TTC19Q6DKK2 380 aaPredicted RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 RGS9BPQ6ZS82 235 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 CYP4V2Q6ZWL3 525 aaPredicted RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 CYS1Q717R9 158 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 MRPL10Q7Z7H8 261 aaKnown RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 CDKL3Q8IVW4 592 aaPredicted RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 LAS2Q8IYD9 372 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 SCML4Q8N228 414 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 OTUD6BQ8N6M0 293 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 EMC1Q8N766 993 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 CCDC197Q8NCU1 140 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 MCUQ8NE86 351 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 SCAMP5Q8TAC9 235 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 PYROXD1Q8WU10 500 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 CKAP2Q8WWK9 683 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 ASB12Q8WXK4 309 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 CPT1BQ92523 772 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 RSC1A1Q92681 617 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 VOPP1Q96AW1 172 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 ZBTB9Q96C00 473 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 TRMT61AQ96FX7 289 aaKnown RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 REXO5Q96IC2 774 aaKnown RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 CABS1Q96KC9 395 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 CAPNS2Q96L46 248 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 FAM118BQ9BPY3 351 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 SELENOSQ9BQE4 189 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 FERMT1Q9BQL6 677 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 TMEM121Q9BTD3 319 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 TM2D2Q9BX73 214 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 DUSP16Q9BY84 665 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 MAGEH1Q9H213 219 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 NXF3Q9H4D5 531 aaKnown RBP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 NKIRAS1Q9NYS0 192 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.61□□□□□ -1.35
LINC00871-204ENST00000556886 TUBGCP4Q9UGJ1 667 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 PCSK1NQ9UHG2 260 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 SQORQ9Y6N5 450 aa6.61□□□□□ -1.35
LINC00871-204ENST00000556886 CLUHO75153 1309 aa6.6□□□□□ -1.35
LINC00871-204ENST00000556886 TMEM120BA0PK00 339 aa6.6□□□□□ -1.35
LINC00871-204ENST00000556886 FAM47DPA6NHR8 397 aa6.6□□□□□ -1.35
LINC00871-204ENST00000556886 TNPO2O14787 897 aaKnown RBP6.6□□□□□ -1.35
LINC00871-204ENST00000556886 DAB1O75553 588 aa6.6□□□□□ -1.35
LINC00871-204ENST00000556886 IFNB1P01574 187 aa6.6□□□□□ -1.35
LINC00871-204ENST00000556886 GSTA1P08263 222 aa6.6□□□□□ -1.35
LINC00871-204ENST00000556886 ZSCAN5DPP0CG00 497 aa6.6□□□□□ -1.35
LINC00871-204ENST00000556886 KELP23276 732 aa6.6□□□□□ -1.35
LINC00871-204ENST00000556886 IL4RP24394 825 aa6.6□□□□□ -1.35
LINC00871-204ENST00000556886 ATP5F1P24539 256 aaPredicted RBP6.6□□□□□ -1.35
LINC00871-204ENST00000556886 MATKP42679 507 aa6.6□□□□□ -1.35
LINC00871-204ENST00000556886 GEMIN4P57678 1058 aaKnown RBP6.6□□□□□ -1.35
LINC00871-204ENST00000556886 IL9RQ01113 521 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms