RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 TDRKHQ9Y2W6 561 aaKnown RBP17.87■□□□□ 0.45
NEDD1-208ENST00000555806 MRPS18BQ9Y676 258 aaKnown RBP17.87■□□□□ 0.45
NEDD1-208ENST00000555806 FASNP49327 2511 aaKnown RBP17.87■□□□□ 0.45
NEDD1-208ENST00000555806 TCRBV7S3A2A0A539 114 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 C2orf74A8MZ97 194 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 MAP3K7O43318 606 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 KATNA1O75449 491 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 KRT14P02533 472 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 NTRK1P04629 796 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 TCN2P20062 427 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 ACADLP28330 430 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 PRDX3P30048 256 aaKnown RBP17.86■□□□□ 0.45
NEDD1-208ENST00000555806 TTPAP49638 278 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 SARNPP82979 210 aaKnown RBP17.86■□□□□ 0.45
NEDD1-208ENST00000555806 HOOK3Q86VS8 718 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 TMEM126BQ8IUX1 230 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 TBC1D21Q8IYX1 336 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 RASGEF1CQ8N431 466 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 LKAAEAR1Q8TD35 194 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 NAP1L3Q99457 506 aaPredicted RBP17.86■□□□□ 0.45
NEDD1-208ENST00000555806 ACTR10Q9NZ32 417 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 PADI1Q9ULC6 663 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 ICKQ9UPZ9 632 aa17.86■□□□□ 0.45
NEDD1-208ENST00000555806 IQCF5A8MTL0 148 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 BHMG1C9JSJ3 638 aaPredicted RBP17.85■□□□□ 0.45
NEDD1-208ENST00000555806 PGRMC1O00264 195 aaKnown RBP17.85■□□□□ 0.45
NEDD1-208ENST00000555806 PRMT5O14744 637 aaPredicted RBP17.85■□□□□ 0.45
NEDD1-208ENST00000555806 ZSCAN12O43309 604 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 SCRG1O75711 98 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 ST6GAL1P15907 406 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 F8A1P23610 371 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 CCR7P32248 378 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 SHMT2P34897 504 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 HSPA14Q0VDF9 509 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 NFATC3Q12968 1075 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 PTRHD1Q6GMV3 140 aaKnown RBP17.85■□□□□ 0.45
NEDD1-208ENST00000555806 TTC27Q6P3X3 843 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 CES3Q6UWW8 571 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 ADGRF3Q8IZF5 1079 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 KRT222Q8N1A0 295 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 SLC35F6Q8N357 371 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 OR8K5Q8NH50 307 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 OR5K2Q8NHB8 316 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 CARD6Q9BX69 1037 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 KLHL25Q9H0H3 589 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 PIEZO2Q9H5I5 2752 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 MRM3Q9HC36 420 aaKnown RBP17.85■□□□□ 0.45
NEDD1-208ENST00000555806 LHX9Q9NQ69 397 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 KCND1Q9NSA2 647 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 POLG2Q9UHN1 485 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 PCDHB3Q9Y5E6 796 aa17.85■□□□□ 0.45
NEDD1-208ENST00000555806 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.84■□□□□ 0.45
NEDD1-208ENST00000555806 PIPSLA2A3N6 862 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 KDM1AO60341 852 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 CPNE3O75131 537 aaKnown RBP17.84■□□□□ 0.45
NEDD1-208ENST00000555806 NDUFS3O75489 264 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 APOA4P06727 396 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 SFTPCP11686 197 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 PVRP15151 417 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 OAS2P29728 719 aaKnown RBP17.84■□□□□ 0.45
NEDD1-208ENST00000555806 CCR10P46092 362 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 DNASE1L3Q13609 305 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 KCNJ11Q14654 390 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 TMED2Q15363 201 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 ATP1A1-AS1Q5TC04 95 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 UNC5AQ6ZN44 842 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 REXO1L1PQ8IX06 675 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 SLC22A15Q8IZD6 547 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 MPP5Q8N3R9 675 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 CT55Q8WUE5 264 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 ASZ1Q8WWH4 475 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 ZNF501Q96CX3 271 aaPredicted RBP17.84■□□□□ 0.45
NEDD1-208ENST00000555806 MFSD3Q96ES6 412 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 KIFC1Q9BW19 673 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 GNPTGQ9UJJ9 305 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 KCND3Q9UK17 655 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 PLAGL1Q9UM63 463 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 BAHCC1Q9P281 2608 aa17.84■□□□□ 0.45
NEDD1-208ENST00000555806 B8ZZF3 427 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 TMEM150CB9EJG8 249 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 KIF5CO60282 957 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 VAPBO95292 243 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 COILP38432 576 aaPredicted RBP17.83■□□□□ 0.44
NEDD1-208ENST00000555806 EIF3BP55884 814 aaKnown RBP17.83■□□□□ 0.44
NEDD1-208ENST00000555806 POLE2P56282 527 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 DEFB109BQ30KR1 87 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 DNAJC21Q5F1R6 531 aaKnown RBP17.83■□□□□ 0.44
NEDD1-208ENST00000555806 ANKRD22Q5VYY1 191 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 CASC4Q6P4E1 433 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 CCDC137Q6PK04 289 aaKnown RBP17.83■□□□□ 0.44
NEDD1-208ENST00000555806 SPESP1Q6UW49 350 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 VRK3Q8IV63 474 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 CFAP61Q8NHU2 1237 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 GSDMBQ8TAX9 411 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 COG1Q8WTW3 980 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 PANX3Q96QZ0 392 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 OSBPL9Q96SU4 736 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 PITPNM3Q9BZ71 974 aa17.83■□□□□ 0.44
NEDD1-208ENST00000555806 TRMT1Q9NXH9 659 aaKnown RBP17.83■□□□□ 0.44
NEDD1-208ENST00000555806 SAMD15Q9P1V8 674 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms