RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 PSIP1O75475 530 aaKnown RBP9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 RASGRP1O95267 797 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 MATN4O95460 622 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 TNFP01375 233 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 CHRNGP07510 517 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 SLC35G4P0C7Q5 338 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 BCKDHBP21953 392 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 IDSP22304 550 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 MPSTP25325 297 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 SERPINB5P36952 375 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 BDKRB1P46663 353 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 SRP54P61011 504 aaKnown RBP9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 PRKAA1Q13131 559 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 RBBP7Q16576 425 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 C18orf21Q32NC0 220 aaPredicted RBP9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 ARL13AQ5H913 290 aaPredicted RBP9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 TPRG1LQ5T0D9 272 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 METRNLQ641Q3 311 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 TTC23LQ6PF05 361 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 MBOAT1Q6ZNC8 495 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 FRMD7Q6ZUT3 714 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 PIGWQ7Z7B1 504 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 HID1Q8IV36 788 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 TMEFF1Q8IYR6 380 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 RGL4Q8IZJ4 473 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 CACNA2D3Q8IZS8 1091 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 LSMEM2Q8N112 164 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 PDPRQ8NCN5 879 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 CCDC197Q8NCU1 140 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 FAM174AQ8TBP5 190 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 AGR3Q8TD06 166 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 KLHDC7BQ96G42 594 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 PDXPQ96GD0 296 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 SCARF2Q96GP6 870 aaPredicted RBP9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 SEC16BQ96JE7 1060 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 HSPA12BQ96MM6 686 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 SORT1Q99523 831 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 ILKAPQ9H0C8 392 aaPredicted RBP9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 WWP1Q9H0M0 922 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 OR52A5Q9H2C5 316 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 DPEP2Q9H4A9 486 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 GSTO2Q9H4Y5 243 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 PNPOQ9NVS9 261 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 MARCOQ9UEW3 520 aaPredicted RBP9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 ACSL5Q9ULC5 683 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 RAP2CQ9Y3L5 183 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 ANGPTL3Q9Y5C1 460 aa9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 TNPO3Q9Y5L0 923 aaKnown RBP9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 ZFC3H1O60293 1989 aaKnown RBP9.43□□□□□ -0.9
HNRNPC-220ENST00000555585 PDZK1P1A8MUH7 402 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 SNX3O60493 162 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 CCNT2O60583 730 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 SNUPNO95149 360 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 TGDSO95455 350 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 RPS17P08708 135 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 MAOBP27338 520 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 RPL10P27635 214 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 CD38P28907 300 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 ARRB2P32121 409 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 HSPA7P48741 367 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 CLCNKAP51800 687 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 CDH13P55290 713 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 AP1S2P56377 157 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 NAA20P61599 178 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 CDKL1Q00532 357 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 CSTF1Q05048 431 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 CLCQ05315 142 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 DMPKQ09013 629 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 PCBP2Q15366 365 aaKnown RBP eCLIP9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 TCEA2Q15560 299 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 ALG11Q2TAA5 492 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 CDKL4Q5MAI5 379 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 XKR5Q6UX68 686 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 UNC5DQ6UXZ4 953 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 ATG14Q6ZNE5 492 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 ARMCX6Q7L4S7 300 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 PDZD3Q86UT5 571 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 WDR5BQ86VZ2 330 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 DCP2Q8IU60 420 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 WDR75Q8IWA0 830 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 TCAIMQ8N3R3 496 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 AFAP1L2Q8N4X5 818 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 TEX9Q8N6V9 391 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 ZNF781Q8N8C0 355 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 PHC3Q8NDX5 983 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 RFWD2Q8NHY2 731 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 PIWIL2Q8TC59 973 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 MAGEC3Q8TD91 643 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 TRPC4APQ8TEL6 797 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 ZNF483Q8TF39 744 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 RHBDF1Q96CC6 855 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 NSUN5Q96P11 429 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 ORAI3Q9BRQ5 295 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 HGH1Q9BTY7 390 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 TRMOQ9BU70 441 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 ZDHHC5Q9C0B5 715 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 SEMA4BQ9NPR2 832 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 KLHL14Q9P2G3 628 aa9.42□□□□□ -0.9
HNRNPC-220ENST00000555585 OPTCQ9UBM4 332 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms