RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 FAM237BA0A1B0GVD1 139 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 UBA6A0AVT1 1052 aaPredicted RBP7.31□□□□□ -1.24
LINC00640-201ENST00000554409 MAGEB16A2A368 324 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 USP27XA6NNY8 438 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 PRMT5O14744 637 aaPredicted RBP7.31□□□□□ -1.24
LINC00640-201ENST00000554409 ZNF185O15231 689 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 GPC4O75487 556 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 ZBTB11O95625 1053 aaPredicted RBP7.31□□□□□ -1.24
LINC00640-201ENST00000554409 ITGB2P05107 769 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 MSL3P1P0C860 447 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 OGNP20774 298 aaKnown RBP7.31□□□□□ -1.24
LINC00640-201ENST00000554409 CCR7P32248 378 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 MAGEA3P43357 314 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 VPS41P49754 854 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 KPNA2P52292 529 aaKnown RBP7.31□□□□□ -1.24
LINC00640-201ENST00000554409 ADARP55265 1226 aaKnown RBP7.31□□□□□ -1.24
LINC00640-201ENST00000554409 SH3BP2P78314 561 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 HSD11B2P80365 405 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 ACY1Q03154 408 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 FOXM1Q08050 763 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 ABHD18Q0P651 414 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 PRKAA1Q13131 559 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 TYSND1Q2T9J0 566 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 SYTL3Q4VX76 610 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 DNAJC21Q5F1R6 531 aaKnown RBP7.31□□□□□ -1.24
LINC00640-201ENST00000554409 ANKRD22Q5VYY1 191 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 PAPD7Q5XG87 772 aaKnown RBP7.31□□□□□ -1.24
LINC00640-201ENST00000554409 MRNIPQ6NTE8 343 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 VASH2Q86V25 355 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 CAND1Q86VP6 1230 aaKnown RBP7.31□□□□□ -1.24
LINC00640-201ENST00000554409 PPP1R3BQ86XI6 285 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 TBC1D21Q8IYX1 336 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 SLC22A15Q8IZD6 547 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 CACNA2D3Q8IZS8 1091 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 D2HGDHQ8N465 521 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 ESX1Q8N693 406 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 IL22RA1Q8N6P7 574 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 ZSCAN1Q8NBB4 408 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 SIDT2Q8NBJ9 832 aaKnown RBP7.31□□□□□ -1.24
LINC00640-201ENST00000554409 PHC3Q8NDX5 983 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 OR4E2Q8NGC2 313 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 OR5K2Q8NHB8 316 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 MFSD3Q96ES6 412 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 PANX3Q96QZ0 392 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 OR6C1Q96RD1 312 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 TCF12Q99081 682 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 SRMSQ9H3Y6 488 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 PDE7BQ9NP56 450 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 C1GALT1Q9NS00 363 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 PCYOX1Q9UHG3 505 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 POLG2Q9UHN1 485 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 CDYLQ9Y232 598 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 BTRCQ9Y297 605 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 ZFYVE26Q68DK2 2539 aa7.31□□□□□ -1.24
LINC00640-201ENST00000554409 AHCTF1Q8WYP5 2266 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 IGSF10Q6WRI0 2623 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 SDR42E2A6NKP2 422 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 C2orf74A8MZ97 194 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 BTN3A3O00478 584 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 BTN3A1O00481 513 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 KPNA5O15131 536 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 PFDN6O15212 129 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 KDM1AO60341 852 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 AVILO75366 819 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 SPAG6O75602 509 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 SLCO2B1O94956 709 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 VAPBO95292 243 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 APOA4P06727 396 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 LIFP15018 202 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 FOLR1P15328 257 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 ZNF28P17035 718 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 PAMP19021 973 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 POLR2CP19387 275 aaPredicted RBP7.3□□□□□ -1.24
LINC00640-201ENST00000554409 WT1P19544 449 aaPredicted RBP7.3□□□□□ -1.24
LINC00640-201ENST00000554409 AOAHP28039 575 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 SHMT2P34897 504 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 STAT5AP42229 794 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 ARCN1P48444 511 aaKnown RBP7.3□□□□□ -1.24
LINC00640-201ENST00000554409 TUBB4BP68371 445 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 PRR20EP86478 221 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 PRR20CP86479 221 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 PRR20DP86480 221 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 PRR20BP86481 221 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 PRR20AP86496 221 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 TUBB3Q13509 450 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 PTK6Q13882 451 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 TUBB2AQ13885 445 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 TMED2Q15363 201 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 KCTD19Q17RG1 926 aaPredicted RBP7.3□□□□□ -1.24
LINC00640-201ENST00000554409 CRTC2Q53ET0 693 aaPredicted RBP7.3□□□□□ -1.24
LINC00640-201ENST00000554409 TMTC4Q5T4D3 741 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 RNF187Q5TA31 235 aaPredicted RBP7.3□□□□□ -1.24
LINC00640-201ENST00000554409 LYPD8Q6UX82 237 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 UNC5DQ6UXZ4 953 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 TIPARPQ7Z3E1 657 aaKnown RBP7.3□□□□□ -1.24
LINC00640-201ENST00000554409 SDCCAG8Q86SQ7 713 aaPredicted RBP7.3□□□□□ -1.24
LINC00640-201ENST00000554409 LDB1Q86U70 411 aaPredicted RBP7.3□□□□□ -1.24
LINC00640-201ENST00000554409 TMEM135Q86UB9 458 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 AMIGO1Q86WK6 493 aa7.3□□□□□ -1.24
LINC00640-201ENST00000554409 PPIL6Q8IXY8 311 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms