RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TBX18O95935 607 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 SCGB1D1O95968 90 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 LAMP2P13473 410 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 PON1P27169 355 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 CHRNA7P36544 502 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 MAGEA11P43364 429 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 PRKCZQ05513 592 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 CRYMQ14894 314 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 SGSM1Q2NKQ1 1148 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 CTU2Q2VPK5 515 aaKnown RBP3.48□□□□□ -1.85
SCFD1-210ENST00000553693 SPINK14Q6IE38 97 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 PSRC1Q6PGN9 363 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-210ENST00000553693 LINGO4Q6UY18 593 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 SCYL3Q8IZE3 742 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 ZNF843Q8N446 348 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 CPSF7Q8N684 471 aaKnown RBP3.48□□□□□ -1.85
SCFD1-210ENST00000553693 HSD17B8Q92506 261 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 CCDC34Q96HJ3 373 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 MAGED4Q96JG8 741 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 C18orf12Q96KH6 178 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 ABHD6Q9BV23 337 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 ORC3Q9UBD5 711 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-210ENST00000553693 CORO1CQ9ULV4 474 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-210ENST00000553693 ARAP3Q8WWN8 1544 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 CARMIL1Q5VZK9 1371 aa3.48□□□□□ -1.85
SCFD1-210ENST00000553693 FRMD3A2A2Y4 597 aa3.47□□□□□ -1.85
SCFD1-210ENST00000553693 E9PQ18 207 aa3.47□□□□□ -1.85
SCFD1-210ENST00000553693 KLF11O14901 512 aa3.47□□□□□ -1.85
SCFD1-210ENST00000553693 PRKRAO75569 313 aaKnown RBP3.47□□□□□ -1.85
SCFD1-210ENST00000553693 ACP2P11117 423 aa3.47□□□□□ -1.85
SCFD1-210ENST00000553693 EFNA1P20827 205 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-210ENST00000553693 NMBRP28336 390 aa3.47□□□□□ -1.85
SCFD1-210ENST00000553693 PPP2R2BQ00005 443 aa3.47□□□□□ -1.85
SCFD1-210ENST00000553693 UGP2Q16851 508 aa3.47□□□□□ -1.85
SCFD1-210ENST00000553693 TBC1D16Q8TBP0 767 aa3.47□□□□□ -1.85
SCFD1-210ENST00000553693 FAM81BQ96LP2 452 aa3.47□□□□□ -1.85
SCFD1-210ENST00000553693 TRAF4Q9BUZ4 470 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-210ENST00000553693 ACKR4Q9NPB9 350 aa3.47□□□□□ -1.85
SCFD1-210ENST00000553693 EXO1Q9UQ84 846 aaKnown RBP3.47□□□□□ -1.85
SCFD1-210ENST00000553693 PCDHGA5Q9Y5G8 931 aa3.47□□□□□ -1.85
SCFD1-210ENST00000553693 LYVE1Q9Y5Y7 322 aa3.47□□□□□ -1.85
SCFD1-210ENST00000553693 MADDQ8WXG6 1647 aa3.47□□□□□ -1.85
SCFD1-210ENST00000553693 KIF27Q86VH2 1401 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 PRSS51A0A1B0GVH4 220 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 CDRT15L2A8MXV6 281 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 B4E171 279 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 RB1P06400 928 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 RARGP13631 454 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 MAN1A1P33908 653 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 TSPAN7P41732 249 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 CDH8P55286 799 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 SP3Q02447 781 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 MAMLD1Q13495 774 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 KCNC3Q14003 757 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 DCAF10Q5QP82 559 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 WDR78Q5VTH9 848 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 JAKMIP3Q5VZ66 844 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 BSPRYQ5W0U4 402 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 IKBIPQ70UQ0 350 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 SH2D6Q7Z4S9 175 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 OR2T11Q8NH01 316 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 SCFD2Q8WU76 684 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 HPSE2Q8WWQ2 592 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 DYRK2Q92630 601 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 OLA1Q9NTK5 396 aaKnown RBP3.46□□□□□ -1.86
SCFD1-210ENST00000553693 INTS9Q9NV88 658 aaKnown RBP3.46□□□□□ -1.86
SCFD1-210ENST00000553693 PAG1Q9NWQ8 432 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 NPAP1Q9NZP6 1156 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 FBXL17Q9UF56 701 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 OSGIN1Q9UJX0 560 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 BCORL1Q5H9F3 1711 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 COL5A2P05997 1499 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-210ENST00000553693 IQGAP2Q13576 1575 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 CFAP43Q8NDM7 1665 aa3.46□□□□□ -1.86
SCFD1-210ENST00000553693 LOC101059948A0A1B0GTJ6 334 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 PRLRP16471 622 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 GABRB1P18505 474 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 CA6P23280 308 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 CX3CL1P78423 397 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 KRT33BQ14525 404 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 MELKQ14680 651 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 CYP4A22Q5TCH4 519 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 KIAA0930Q6ICG6 404 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-210ENST00000553693 CCDC70Q6NSX1 233 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 DOK6Q6PKX4 331 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 MARVELD2Q8N4S9 558 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 UCMAQ8WVF2 138 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 CLEC7AQ9BXN2 247 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 LAT2Q9GZY6 243 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 CHMP1AQ9HD42 196 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-210ENST00000553693 TAS2R14Q9NYV8 317 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 AASSQ9UDR5 926 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 ASIC3Q9UHC3 531 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 ZDHHC2Q9UIJ5 367 aa3.45□□□□□ -1.86
SCFD1-210ENST00000553693 RIMS1Q86UR5 1692 aaKnown RBP3.45□□□□□ -1.86
SCFD1-210ENST00000553693 UGGT2Q9NYU1 1516 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 E9PI62 339 aa3.44□□□□□ -1.86
SCFD1-210ENST00000553693 RSL1D1O76021 490 aaKnown RBP3.44□□□□□ -1.86
SCFD1-210ENST00000553693 GATA1P15976 413 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-210ENST00000553693 PDX1P52945 283 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms