RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ADGRF3Q8IZF5 1079 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 RASGEF1CQ8N431 466 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 PRELID2Q8N945 189 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 OR5AR1Q8NGP9 310 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 OR5K2Q8NHB8 316 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 ASZ1Q8WWH4 475 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 ZNF501Q96CX3 271 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-207ENST00000553290 PBKQ96KB5 322 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 PPM1MQ96MI6 270 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 CARD6Q9BX69 1037 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 PITPNM3Q9BZ71 974 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 LHX9Q9NQ69 397 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 LATS2Q9NRM7 1088 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 TREX1Q9NSU2 369 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 STARD5Q9NSY2 213 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 TUBD1Q9UJT1 453 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 PCDHGA6Q9Y5G7 932 aa12.57□□□□□ -0.4
ACTN1-207ENST00000553290 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-207ENST00000553290 PIPSLA2A3N6 862 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 C21orf140B9A014 251 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 BHMG1C9JSJ3 638 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-207ENST00000553290 PRMT5O14744 637 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-207ENST00000553290 TERTO14746 1132 aaKnown RBP12.56□□□□□ -0.4
ACTN1-207ENST00000553290 CD3EAPO15446 510 aaKnown RBP12.56□□□□□ -0.4
ACTN1-207ENST00000553290 CPNE3O75131 537 aaKnown RBP12.56□□□□□ -0.4
ACTN1-207ENST00000553290 KATNA1O75449 491 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 SCRG1O75711 98 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 RECKO95980 971 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 NTRK1P04629 796 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 MSL3P1P0C860 447 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 ITGB6P18564 788 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 F8A1P23610 371 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 CRADDP78560 199 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 NFATC3Q12968 1075 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 SEMA3AQ14563 771 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 GPR19Q15760 415 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 ARMC3Q5W041 872 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 C16orf46Q6P387 395 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 FBXO38Q6PIJ6 1188 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 HOOK3Q86VS8 718 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 SLC22A15Q8IZD6 547 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 MPP5Q8N3R9 675 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 RNF31Q96EP0 1072 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 NAP1L3Q99457 506 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-207ENST00000553290 KIFC1Q9BW19 673 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 FAM117AQ9C073 453 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 XKR8Q9H6D3 395 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 GRPEL1Q9HAV7 217 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 MRM3Q9HC36 420 aaKnown RBP12.56□□□□□ -0.4
ACTN1-207ENST00000553290 ACTR10Q9NZ32 417 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 TTC7AQ9ULT0 858 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-207ENST00000553290 ICKQ9UPZ9 632 aa12.56□□□□□ -0.4
ACTN1-207ENST00000553290 MRPS18BQ9Y676 258 aaKnown RBP12.56□□□□□ -0.4
ACTN1-207ENST00000553290 HELZ2Q9BYK8 2649 aaKnown RBP12.56□□□□□ -0.4
ACTN1-207ENST00000553290 GPC4O75487 556 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 RPN2P04844 631 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 APOA4P06727 396 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 ST6GAL1P15907 406 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 MGAT1P26572 445 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 NMBRP28336 390 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 OAS2P29728 719 aaKnown RBP12.55□□□□□ -0.4
ACTN1-207ENST00000553290 CCR7P32248 378 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 POLE2P56282 527 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 HSPA14Q0VDF9 509 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 KCNAB2Q13303 367 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 DNASE1L3Q13609 305 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 DNAJC21Q5F1R6 531 aaKnown RBP12.55□□□□□ -0.4
ACTN1-207ENST00000553290 SPESP1Q6UW49 350 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 NAPRTQ6XQN6 538 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 UNC5AQ6ZN44 842 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 LRRC6Q86X45 466 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 CT55Q8WUE5 264 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 APOBEC4Q8WW27 367 aaKnown RBP12.55□□□□□ -0.4
ACTN1-207ENST00000553290 SEC14L1Q92503 715 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 CPT1BQ92523 772 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 MAGOHBQ96A72 148 aaKnown RBP12.55□□□□□ -0.4
ACTN1-207ENST00000553290 TRAPPC9Q96Q05 1148 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 PANX3Q96QZ0 392 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 NRTNQ99748 197 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 AP1M1Q9BXS5 423 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 GPR87Q9BY21 358 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 SLC25A18Q9H1K4 315 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 SYBUQ9NX95 663 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 OR6C2Q9NZP2 312 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 MARCH4Q9P2E8 410 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-207ENST00000553290 GNPTGQ9UJJ9 305 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 SOX13Q9UN79 622 aa12.55□□□□□ -0.4
ACTN1-207ENST00000553290 TDRKHQ9Y2W6 561 aaKnown RBP12.55□□□□□ -0.4
ACTN1-207ENST00000553290 HEMK1Q9Y5R4 338 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-207ENST00000553290 TMEM150CB9EJG8 249 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 J3QKU1 62 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 KPNA5O15131 536 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 PFDN6O15212 129 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 ZSCAN12O43309 604 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 NDUFS3O75489 264 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 CREG1O75629 220 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 KRT14P02533 472 aa12.54□□□□□ -0.4
ACTN1-207ENST00000553290 KLK3P07288 261 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-207ENST00000553290 CHRM5P08912 532 aaPredicted RBP12.54□□□□□ -0.4
ACTN1-207ENST00000553290 RPS3P23396 243 aaKnown RBP eCLIP12.54□□□□□ -0.42e-7■■□□□ 13.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms