RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 FAM69AQ5T7M9 428 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 PRAMEF13Q5VWM6 474 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 CTRB2Q6GPI1 263 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 TATDN1Q6P1N9 297 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 ULK3Q6PHR2 472 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 APTXQ7Z2E3 356 aaKnown RBP8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 ESX1Q8N693 406 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 TAAR8Q969N4 342 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 SMARCD1Q96GM5 515 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 RNF157Q96PX1 679 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 SECISBP2Q96T21 854 aaKnown RBP8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 LGMNQ99538 433 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 LHPPQ9H008 270 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 OPTCQ9UBM4 332 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 CDC14AQ9UNH5 594 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 ZFR2Q9UPR6 939 aaKnown RBP8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 TAF6LQ9Y6J9 622 aa8.65□□□□□ -1.02
PPFIA2-220ENST00000550584 CREBL2O60519 120 aaPredicted RBP8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 PAX6P26367 422 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 ADH6P28332 368 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 RPS19P39019 145 aaKnown RBP8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 NR0B1P51843 470 aaKnown RBP8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 EN1Q05925 392 aaPredicted RBP8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 ZNF543Q08ER8 600 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 NDUFA9Q16795 377 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 DPY19L1Q2PZI1 675 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 RAP1GAP2Q684P5 730 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 USP45Q70EL2 814 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 TRIM48Q8IWZ4 208 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 SLC35F3Q8IY50 421 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 Q8N402 240 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 CHDHQ8NE62 594 aaPredicted RBP8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 TFAP2CQ92754 450 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 LRRC58Q96CX6 371 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 GIMAP5Q96F15 307 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 FBXL20Q96IG2 436 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 FNDC11Q9BVV2 318 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 ASPNQ9BXN1 380 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 OXSMQ9NWU1 459 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 HOXC10Q9NYD6 342 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 SAE1Q9UBE0 346 aaPredicted RBP8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 AFF4Q9UHB7 1163 aaKnown RBP8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 CLEC4AQ9UMR7 237 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 AKT3Q9Y243 479 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 IRS2Q9Y4H2 1338 aa8.65□□□□□ -1.03
PPFIA2-220ENST00000550584 RFXANKO14593 260 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 SHOXO15266 292 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 OR10H3O60404 316 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 C1QBP02746 253 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 ERVK-10P10266 1014 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 HOXB1P14653 301 aaPredicted RBP8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 ITGA3P26006 1051 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 GBX2P52951 348 aaPredicted RBP8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 CD81P60033 236 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 DUSP7Q16829 419 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 ARL13AQ5H913 290 aaPredicted RBP8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 RAB41Q5JT25 222 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 LYPLAL1Q5VWZ2 237 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 PET117Q6UWS5 81 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 SERPINA13PQ6UXR4 307 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 LINGO2Q7L985 606 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 RNF130Q86XS8 419 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 SLC41A1Q8IVJ1 513 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 MARCH10Q8NA82 808 aaPredicted RBP8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 CHFRQ96EP1 664 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 RRNAD1Q96FB5 475 aaKnown RBP8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 OR52E6Q96RD3 313 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 CD300AQ9UGN4 299 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 DAGLAQ9Y4D2 1042 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 UTRNP46939 3433 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 BORCS7-ASMTA0A0B4J1R7 106 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 RAD17O75943 681 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 CDRT1O95170 752 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 CPB1P15086 417 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 HTR1EP28566 365 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 SERPINF1P36955 418 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 PLA2G16P53816 162 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 FMO1Q01740 532 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 ZRANB3Q5FWF4 1079 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 ALG1LQ6GMV1 187 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 LCN8Q6JVE9 175 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 EEPD1Q7L9B9 569 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 SEMA6DQ8NFY4 1073 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 OR1J4Q8NGS1 313 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 RXFP2Q8WXD0 754 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 UBE2E3Q969T4 207 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 ZNF471Q9BX82 626 aaPredicted RBP8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 CNTNAP2Q9UHC6 1331 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 TNS3Q68CZ2 1445 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 LYRM1O43325 122 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 ARL6IP5O75915 188 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 PPP3CBP16298 524 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 GSTM3P21266 225 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 VAMP1P23763 118 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 NOS3P29474 1203 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 DSG2Q14126 1118 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 ZMYND11Q15326 602 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 EPHA10Q5JZY3 1008 aa8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 RC3H1Q5TC82 1133 aaKnown RBP8.64□□□□□ -1.03
PPFIA2-220ENST00000550584 FAM122BQ7Z309 247 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms