RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 HSD3B7Q9H2F3 369 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 OXSMQ9NWU1 459 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 FAM120CQ9NX05 1096 aaKnown RBP9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 PCDHGB1Q9Y5G3 927 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 TOGARAM1Q9Y4F4 1720 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 TRIM3O75382 744 aaPredicted RBP9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 CST1P01037 141 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 FABP3P05413 133 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 MPP1Q00013 466 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 FAM189A2Q15884 450 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 FAM214AQ32MH5 1076 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 LIPJQ5W064 366 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 FBXW10Q5XX13 1052 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 ENPP7Q6UWV6 458 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 RHEBL1Q8TAI7 183 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 PNPT1Q8TCS8 783 aaKnown RBP9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 NDRG1Q92597 394 aaKnown RBP9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 OR2M4Q96R27 311 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 YIPF3Q9GZM5 350 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 DNAJB4Q9UDY4 337 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 CDH7Q9ULB5 785 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 SAMHD1Q9Y3Z3 626 aaKnown RBP9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 PCDHGB7Q9Y5F8 929 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 FAM221BA6H8Z2 402 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 MAGEB17A8MXT2 336 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 TOR1BO14657 336 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 RPL4P36578 427 aaKnown RBP9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 CXXC5Q7LFL8 322 aaKnown RBP9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 PEG10Q86TG7 708 aaKnown RBP9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 CROCCP3Q8IVE0 287 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 MFSD3Q96ES6 412 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 LMLNQ96KR4 655 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 TMEM209Q96SK2 561 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 EPYCQ99645 322 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 C1orf50Q9BV19 199 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 UNKQ9C0B0 810 aaKnown RBP9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 HMG20AQ9NP66 347 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 BLACEA4D250 179 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 C2orf74A8MZ97 194 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 BCL10O95999 233 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 KLK3P07288 261 aaPredicted RBP9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 NR2F6P10588 404 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 HOXD8P13378 290 aaPredicted RBP9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 GSTM3P21266 225 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 TIE1P35590 1138 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 FGD2Q7Z6J4 655 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 NXPE1Q8N323 547 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 ST13P5Q8NFI4 369 aaPredicted RBP9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 NSMCE3Q96MG7 304 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 NDC1Q9BTX1 674 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 SERTAD3Q9UJW9 196 aa9.08□□□□□ -0.96
PPFIA2-216ENST00000549396 SIN3BO75182 1162 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 ALOX5P09917 674 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 CD247P20963 164 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 HOXD13P35453 343 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 LBX1P52954 281 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 IL23RQ5VWK5 629 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 ZCCHC12Q6PEW1 402 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 DNAJC14Q6Y2X3 702 aaPredicted RBP9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 MSANTD1Q6ZTZ1 278 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 CYP2U1Q7Z449 544 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 JAZF1Q86VZ6 243 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 OR9A1PQ8NGU1 263 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 DLGAP2Q9P1A6 1054 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 EPHA6Q9UF33 1036 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 LAMB2P55268 1798 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 PAPPA2Q9BXP8 1791 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 XKRYO14609 159 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 YKT6O15498 198 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 BCAS2O75934 225 aaPredicted RBP9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 MT-CO1P00395 513 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 CSF2RAP15509 400 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 MYL9P24844 172 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 HOXA9P31269 272 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 GRIA3P42263 894 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 HSPA7P48741 367 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 DHPSP49366 369 aaPredicted RBP9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 SLC10A7Q0GE19 358 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 CCDC85BQ15834 202 aaPredicted RBP9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 ALFQ53S48 1182 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 AMER2Q8N7J2 671 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 SIDT2Q8NBJ9 832 aaKnown RBP9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 ZMIZ2Q8NF64 920 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 OR6C4Q8NGE1 309 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 FBXO30Q8TB52 745 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 CLEC4CQ8WTT0 213 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 HMGB4Q8WW32 186 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 RCN3Q96D15 328 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 IKZF4Q9H2S9 585 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 VPS29Q9UBQ0 182 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 RSL24D1Q9UHA3 163 aaKnown RBP9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 GTF2A1LQ9UNN4 478 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 AQP12BA6NM10 295 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 FADS2P1A8MWK0 482 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 AK1P00568 194 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 RABIFP47224 123 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 PTSQ03393 145 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 GRIK2Q13002 908 aa9.07□□□□□ -0.96
PPFIA2-216ENST00000549396 RUNX3Q13761 415 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms