RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 APOA4P06727 396 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 PVRP15151 417 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 ZNF28P17035 718 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 NELFEP18615 380 aaKnown RBP15.32■□□□□ 0.04
DDX54-205ENST00000548786 WT1P19544 449 aaPredicted RBP15.32■□□□□ 0.04
DDX54-205ENST00000548786 CDH3P22223 829 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 CD82P27701 267 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 AOAHP28039 575 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 MAGEA3P43357 314 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 DHX9Q08211 1270 aaKnown RBP15.32■□□□□ 0.04
DDX54-205ENST00000548786 VAC14Q08AM6 782 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 TUBB3Q13509 450 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 THOC5Q13769 683 aaKnown RBP15.32■□□□□ 0.04
DDX54-205ENST00000548786 TMED2Q15363 201 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 KIAA1614Q5VZ46 1190 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 TRIM73Q86UV7 250 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 AMIGO1Q86WK6 493 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 DTX1Q86Y01 620 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 RASGRP3Q8IV61 690 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 DENND6AQ8IWF6 608 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 SLC22A15Q8IZD6 547 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 CACNA2D3Q8IZS8 1091 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 LMNTD1Q8N9Z9 388 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 ASZ1Q8WWH4 475 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 KLHL6Q8WZ60 621 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 UBXN4Q92575 508 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 LPGAT1Q92604 370 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 NKD1Q969G9 470 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 STAMBPL1Q96FJ0 436 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 SIGLEC10Q96LC7 697 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 TEFMQ96QE5 360 aaKnown RBP15.32■□□□□ 0.04
DDX54-205ENST00000548786 KRT12Q99456 494 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 CARD6Q9BX69 1037 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 ULBP3Q9BZM4 244 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 FBXO6Q9NRD1 293 aaPredicted RBP15.32■□□□□ 0.04
DDX54-205ENST00000548786 C20orf96Q9NUD7 363 aaPredicted RBP15.32■□□□□ 0.04
DDX54-205ENST00000548786 CDYLQ9Y232 598 aa15.32■□□□□ 0.04
DDX54-205ENST00000548786 ZCWPW2A0A1B0GU75 182 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 KRT87PA6NCN2 255 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 SLC9B1P1A6NJY1 282 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 CASQ1P31415 396 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 ATP1A2P50993 1020 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 CTBP1Q13363 440 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 GPR19Q15760 415 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 TYSND1Q2T9J0 566 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 BBS9Q3SYG4 887 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 MSS51Q4VC12 460 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 RNF187Q5TA31 235 aaPredicted RBP15.31■□□□□ 0.04
DDX54-205ENST00000548786 SYT10Q6XYQ8 523 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 CENPUQ71F23 418 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 OTOAQ7RTW8 1153 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 TIPARPQ7Z3E1 657 aaKnown RBP15.31■□□□□ 0.04
DDX54-205ENST00000548786 TAX1BP1Q86VP1 789 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 CILP2Q8IUL8 1156 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 TBC1D21Q8IYX1 336 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 ADGRF3Q8IZF5 1079 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 C2orf73Q8N5S3 287 aaPredicted RBP15.31■□□□□ 0.04
DDX54-205ENST00000548786 GSDMBQ8TAX9 411 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 SLCO2A1Q92959 643 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 BIRC8Q96P09 236 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 B3GNT4Q9C0J1 378 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 TFB2MQ9H5Q4 396 aaKnown RBP15.31■□□□□ 0.04
DDX54-205ENST00000548786 GALPQ9UBC7 116 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 LNPEPQ9UIQ6 1025 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 POMT2Q9UKY4 750 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 ATMQ13315 3056 aa15.31■□□□□ 0.04
DDX54-205ENST00000548786 MAGEB16A2A368 324 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.3■□□□□ 0.04
DDX54-205ENST00000548786 K7ENP7 123 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 PFDN6O15212 129 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 GPC4O75487 556 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 KIAA0754O94854 1291 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 TIAF1O95411 115 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 TPBGLP0DKB5 382 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 LIFP15018 202 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 CHRM3P20309 590 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 OGNP20774 298 aaKnown RBP15.3■□□□□ 0.04
DDX54-205ENST00000548786 RPS3P23396 243 aaKnown RBP eCLIP15.3■□□□□ 0.04
DDX54-205ENST00000548786 IVDP26440 423 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 PRDX3P30048 256 aaKnown RBP15.3■□□□□ 0.04
DDX54-205ENST00000548786 SLC1A2P43004 574 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 BDKRB1P46663 353 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 CYP4F2P78329 520 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 HSD11B2P80365 405 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 MPP1Q00013 466 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 PLOD1Q02809 727 aaPredicted RBP15.3■□□□□ 0.04
DDX54-205ENST00000548786 C2orf54Q08AI8 447 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 COL9A2Q14055 689 aaPredicted RBP15.3■□□□□ 0.04
DDX54-205ENST00000548786 LONRF1Q17RB8 773 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 INO80CQ6PI98 192 aaPredicted RBP15.3■□□□□ 0.04
DDX54-205ENST00000548786 CNSTQ6PJW8 725 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 UNC5AQ6ZN44 842 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 TMEM135Q86UB9 458 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 LRRC6Q86X45 466 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.3■□□□□ 0.04
DDX54-205ENST00000548786 GALNT6Q8NCL4 622 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 OR5K2Q8NHB8 316 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 CFAP36Q96G28 342 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 SLC41A2Q96JW4 573 aa15.3■□□□□ 0.04
DDX54-205ENST00000548786 IL17FQ96PD4 163 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms