RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ATG4AQ8WYN0 398 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 TFGQ92734 400 aaPredicted RBP6.52□□□□□ -1.37
SCAF11-211ENST00000547950 MR1Q95460 341 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 FCRL4Q96PJ5 515 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 RUFY1Q96T51 708 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 CD180Q99467 661 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 TUBB2BQ9BVA1 445 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 TLR10Q9BXR5 811 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 XKR8Q9H6D3 395 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 LRRC40Q9H9A6 602 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 COG4Q9H9E3 785 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 VPS37BQ9H9H4 285 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 NLE1Q9NVX2 485 aaPredicted RBP6.52□□□□□ -1.37
SCAF11-211ENST00000547950 TUBD1Q9UJT1 453 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 ZNF148Q9UQR1 794 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 POLHQ9Y253 713 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 KCNMB2Q9Y691 235 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 AHCTF1Q8WYP5 2266 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 TENM4Q6N022 2769 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 IGLV3-16A0A075B6K0 115 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 CCDC162PA2VCL2 907 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 GOLGA6L3A6NEY3 463 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 C21orf140B9A014 251 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 E7EVH7 732 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 MKRN2OSH3BPM6 223 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 K7EM74 188 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 BTN3A3O00478 584 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 AP2A1O95782 977 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 GAS8O95995 478 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 KLK3P07288 261 aaPredicted RBP6.51□□□□□ -1.37
SCAF11-211ENST00000547950 ETS1P14921 441 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 NR1D1P20393 614 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 ACRV1P26436 265 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 PTPN4P29074 926 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 STIP1P31948 543 aaKnown RBP6.51□□□□□ -1.37
SCAF11-211ENST00000547950 CSE1LP55060 971 aaKnown RBP6.51□□□□□ -1.37
SCAF11-211ENST00000547950 RPS18P62269 152 aaKnown RBP6.51□□□□□ -1.37
SCAF11-211ENST00000547950 RPS15P62841 145 aaKnown RBP6.51□□□□□ -1.37
SCAF11-211ENST00000547950 KLF1Q13351 362 aaPredicted RBP6.51□□□□□ -1.37
SCAF11-211ENST00000547950 IGFBP7Q16270 282 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 DBN1Q16643 649 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 P3H1Q32P28 736 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 CRTC2Q53ET0 693 aaPredicted RBP6.51□□□□□ -1.37
SCAF11-211ENST00000547950 PPP1R21Q6ZMI0 780 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 PRUNE1Q86TP1 453 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 LINC00523Q86TU6 105 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 HOOK3Q86VS8 718 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 AMIGO1Q86WK6 493 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 KLHDC8BQ8IXV7 354 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 D2HGDHQ8N465 521 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 TEX19Q8NA77 164 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 SLC38A9Q8NBW4 561 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 OR52E1Q8NGJ3 308 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 OR6P1Q8NGX9 317 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 SLC35B2Q8TB61 432 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 C1orf54Q8WWF1 131 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 ZNF501Q96CX3 271 aaPredicted RBP6.51□□□□□ -1.37
SCAF11-211ENST00000547950 CLIP3Q96DZ5 547 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 HES6Q96HZ4 224 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 HGH1Q9BTY7 390 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 GPR87Q9BY21 358 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 SLC7A5P2Q9GIP4 190 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 OR52A5Q9H2C5 316 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 ACTL8Q9H568 366 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 ZNF395Q9H8N7 513 aaPredicted RBP6.51□□□□□ -1.37
SCAF11-211ENST00000547950 ETNK1Q9HBU6 452 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 C1GALT1Q9NS00 363 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 IMPACTQ9P2X3 320 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 SERTAD3Q9UJW9 196 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 TLK1Q9UKI8 766 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 GUCA1BQ9UMX6 200 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 FARSAQ9Y285 508 aaKnown RBP6.51□□□□□ -1.37
SCAF11-211ENST00000547950 PRSS21Q9Y6M0 314 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 CAPN6Q9Y6Q1 641 aa6.51□□□□□ -1.37
SCAF11-211ENST00000547950 TRBV5-4A0A0C4DH59 114 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 MROH6A6NGR9 719 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 C2orf74A8MZ97 194 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 TMEM150CB9EJG8 249 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 H7C0S8 307 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 MEN1O00255 615 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 BTN3A1O00481 513 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 ARHGAP6O43182 974 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 LIASO43766 372 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 OR1I1O60431 355 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 CPNE3O75131 537 aaKnown RBP6.5□□□□□ -1.37
SCAF11-211ENST00000547950 DNAJB5O75953 348 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 AP2A2O94973 939 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 FTH1P02794 183 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 ZSCAN5DPP0CG00 497 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 PVRP15151 417 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 ST6GAL1P15907 406 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 MSNP26038 577 aaKnown RBP6.5□□□□□ -1.37
SCAF11-211ENST00000547950 CASRP41180 1078 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 GRIA1P42261 906 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 NSG1P42857 185 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 CD151P48509 253 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 CCL11P51671 97 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 CDH17Q12864 832 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 RPA4Q13156 261 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 GPS2Q13227 327 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms